Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01074 ATGAATCCTCAAGGTCGAGTGAAGGAAGAGTTTCTTGGAGAAAGTTCTTCCTTTTGCGGTGGCTATGATCCACAGCCAATAATGATTGTTCCTCAACCAATTGAGGGGCTTCATGAAACTGGTCCTCCACCATTCCTCACAAAAACATACGACATCGTTGATGACCCTTCCACTAACCATATAATTTCCTGGAGCACGGGGAACAACAGCTTCATCGTGTGGGATCCACAGGCCTTTTCCATAACCCTTCTGTCCAGATTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGACAACTCAACACCTATGGGTTTAAAAAGGTGGATCCAGATAAGTGGGAATTTGCTAATGAGATGTTTCTTAGAGGGCAAAGGATTCTTTTGAAGAAAATCAGAAGGAGGAAAACAAATCATCAATCTCAAGCGATGCAGCAAGGTGTGGATCCTTGTGTTGAGGTGGGGCAGTTTGGATTAGATTGGGAAGTTGATCGGTTGAGGCGCGACAGGCAAGTTCTTATGGTGGAGTTGGTGAAACTCAGACAACAGCAACAGAATACAAGAGTTCACATCCAAGCAATGGAAGGAAGGGTTAAAAGGACTGAACAGAAACAGCAACAAATGATGAATTTCTTGGCCAGGGCTATGCAGAATCCCAACTTCATGCAACAATTAGTTCAGCAAAAGGAGTGGAGAAAGGAGCTTGAAGAAGCTTTTTCCAACAAGAGGAGGAGGCCTCTTGATCAAGGGCCTAGTAATGTTGTTGAAGTAGGAGAGTTAGGTTGTGCTGAAGAGTACTCAGGTTTCTTTCAACTTGAACCACAAGTATACACTGACAAGGCATTAGAGTTTGAGGTACCTGATCTAGACCTTGCTGTGAATCTGGAGGAGCAAAGTGGAAGCCAAAAGAGAATGGAGGGAGATTATATTCAACTTGAAAGTATAGATAAAGATATCGATGAATTATTTTGGCAAGATTTGCTCAATGAAGGTATTGAAGATCAAGGTGTACTAGGTGTAGACGTATTGGCTGAGCAACTTGGTTATCTGGCCTCTAGTCCTAAATAG 1065 0.4272 MNPQGRVKEEFLGESSSFCGGYDPQPIMIVPQPIEGLHETGPPPFLTKTYDIVDDPSTNHIISWSTGNNSFIVWDPQAFSITLLSRFFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEMFLRGQRILLKKIRRRKTNHQSQAMQQGVDPCVEVGQFGLDWEVDRLRRDRQVLMVELVKLRQQQQNTRVHIQAMEGRVKRTEQKQQQMMNFLARAMQNPNFMQQLVQQKEWRKELEEAFSNKRRRPLDQGPSNVVEVGELGCAEEYSGFFQLEPQVYTDKALEFEVPDLDLAVNLEEQSGSQKRMEGDYIQLESIDKDIDELFWQDLLNEGIEDQGVLGVDVLAEQLGYLASSPK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01074 354 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst10g01074 354 FunFam Heat shock transcription factor 1 38 135 - -
Spst10g01074 354 Coils Coil 162 182 - -
Spst10g01074 354 Gene3D - 37 136 IPR036388 -
Spst10g01074 354 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst10g01074 354 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Spst10g01074 354 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst10g01074 354 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst10g01074 354 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Spst10g01074 354 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 250 IPR027725 -
Spst10g01074 354 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01074 Spst-Chr10 11474305 11475883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01074 23 352 HSF AT3G22830 53.804 7.94e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Spst10g01074 HSF_DNA-bind 1.4e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01074 K09419 - gmx:100809515 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00155 2 1208303 1210899 Spst10g01074 10 11474305 11475883 PCT