Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01069 ATGGAGGAAGAGAGTGAATGCTTCGAGTGCCTCCGACTTCGAATAAAGTCGGATTTCTCGGAGCAAGTTTTCTTCAATTATGCCATCTCCATTTCTGCTTTTCCTTTCGGATCCTCAGCTATCGTCAATATTTCTGGTACAGCTGATGGTGAAGCTTCGAGCGGTCAATTTATATTGCAATACATGCCGAGTCGTGATAAGAATTGTTTTATCAATTATGTAAATGAATGTAGTTTGGATAGTGATGAAATCACAACTAGGAGTGGTGATCCTGATACTGGTGGAAGTAAAGATAATAATGATGTTAACGGTAGAACTGCTTCATCAGATGATTCTGACAGTGGAAAAGCTTTTTCCGGGAACAGGAATTGTAGTCATTCTCAAAGGTTTTCTTGCTTGAGGACAATCACCTCACTCGCACCGATTGCTCATGTGGGAATGTCTTCTCATTCTACGTTTCAAAAGGTGTCCTCTGATTTCTTGTCTGGGTTGATCGAAGACCACGTGTTAGATTCACTTGATCTCTTCCTTGAAGAAAAAGCATCTGGACGGGACAGTGTAAATTTCCTGAGTTTAATTGGGTTGCCATCGTTTGAAGAGGATGCTTTTCCAGGCTCTTTGAGGCATCCTAACATAGCTCCTGTTCTTGCGCTTTTTAAAACATCCGATCACGTTAATGTGGTGTTTCCAAAGACCCCATACAATTTGGAAAGTATTCTTCATTTTAACCCCAATGCGTTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTCTCAGCCTTATCGTACATACATGGTTTAGGGGTTTCCCATGGTAATATATGCCCATCCAATATCATGTTGACTGAGTCGTTATGGTCTTGGCTGAGATTATGGAATGAGCCTGTGTTGGATTGTAATTTACCTTTGCAGGAGAGTGAAAGCGGTAATTCTGAATCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCATTCTTATGGCCTTTATGCTGATCTAAAACTTTCTCCAACAATAGATTGTCATGCTTGCTTTCAGCAGTGGTGGAGAGGAGAAATAAGCAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCGGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGATGTAGGATGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAGGGTGATGAACAATTGGATTTCACATATTCAACATCTGAAATCCCTCATCATGTATCAGATGAATGTCTATCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGACTTCCTTTGAGCGTTCTCAGAATGGCTGTCCGTTCAGTCTATGAACCTAATGAGTATCCTTCCACAATGCAGAGGCTCTATCAATGGACTCCCGATGAATGCATTCCAGAGTTTTACTATGATCCTCAAATTTTTAAGTCAATACATGATGGTATGGCTGATTTGGCTGTTCCCTCTTGGGCAGAGAGTCCCGAGGATTTCATTAAATTGCATTATGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTACAAAATGTCTGGCCAGGCAGCTATTGCTTCTAAGAATGTCATGCTTCCTCTATCAGAACCCATGATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACGCAACCGCACCCCATCCGTCATGCTACTACCAAAGCAAAACGTCATGGTTCCAGTAAATACGCCAAAGTTTGGAGTCAAGCAACTGAAATGCGCCGAGAGACATATCTTCTATCTCAAACTGCTTATTTAGAAGAACTAGAGCAAGCATCTAAATTTTCTGATCATGCTAGGCATTTGAATGCCTGTTACCATTATCCCATAAATCAAATGACAGGGAAGAACATCTCATATTTGGGAGATCCAACAACAGACACATTTAGTGAAAATATAAGTAAACTACCTTTGATCGACAGAAATTGCCAAGTGCCTTATAAAATGAATCTAATTTCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGTTACTTTGGAAGCAGAAAATATCTTCTTCAAGACTTTGCTCTGAAGATGTTGCTAGGGACATATTTTCTATTGGCTGCCTCTTGGCTGAACTTCATCTTTGCAGGCCACTCTTTGATCCAATCTCATTGTCGATGTACATGGCAGATGGAACCTTACCAGGATTTCTGCAGGATCTGCCTCCTAATATTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCACCTTATTTTCCAAAGACTATCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTAATAGCTAAAGATGAAACCCGTCTCCGTTATGCTGCAAATCTTGCAAAGCACAGAGTTTTCAAGGAAATGGGTGCATTTGCAACTGAAATGTGCACTACTTATTGCTTACCACTTATAGTGAATGCTGTGAGTGATATTGAAGCTGAATGGGCATATATGCTTCTCAAGGAAATCATGAAATGCTTAACAGTGCAAGCAGTGAAAACATTAATCTTGCCAACAATACAGAAAATTTTACAGACCACAGGTTATTTACGTTTAAAGGTTGCACTTCTACAAGATTCATTTGTAAGAGAAATATGGAATCAAGTTGGTAAACAATCATACCTGGAAACTATTCATCCATTGGTTTTGTCAAACTTGTACATTGCTCCAGATAAAAATTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGTGAGGAGCTTGGAGTTCCTATTACCATCCATCAGACTATTTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTATGTGCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTATTTATTGTCAAACAGATGGTACCTTTACTGAAAAATGTTGTTCGTTCCTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTTCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTGCTTGAAGACCTAAGTTGCATACACATTGGGGTACTTATGCAGAAACATATGGACATTGCAGTGCTTCAGGTTGCTGCTTCTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGTATATTCTTCCAAAACTTAAAGAACTATTTGATGAACTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCAACTACTGTTGACAAAAACTTGAAGGTTGGCAAAACAAAAATTGGAGGGGACTTGCACATTGAAAGTCGTATTGATCTAGTGTTGGTACTCTATCCTTCTTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACTTGGCTGATTCTTGAACAATATCTTCTCCGCCATCATAATTGGAAGTGGGAATATGCAGGAGAGTCATCAAAAAATGGTTCAGAAATTATTCTTGCTAGAAGACCTGTAATATCCCAAGGATTTACATCTGAATACAATCCTGCCAAGCTATTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAACTTGATCCCTCAAAGACGACCATTTAAAGTTCATCAAAGTCCAGTAGTAGTGCATGAAGGAATGTCACACCAAATGAACAATGAACCCTGGTATTGGTTCCCTAGTCCATCCACTATATGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGATGATCTTCCATGGAAGATTAGAGCATCTGTTATACACTCCATACGTGCACACCATGGAGCAGTGAGGTCTCTGGCTATTAACCAAGATGAATGTACTGTTTTTACCGCTGGAATTGGCCAAGGATACAAGGGGACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTTTGTCTGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCAAGTGGAAGAGTGGCATCTTGTGATGGAACAATTCACATTTGGAATAGTCAAACAGGGAAGCAAATATTAGTATTTGCTGAGTCCCAAACAGAATCTGGTCATCCTACAAACCATTCATCCGCTGCATCAAAGATTAACAGTGACCAGGCTAATGTGCTAAATTTGAATACACTATCAAATGGAATATTGTCTAGTGCTTTCGATTCAAGTCTTTATACTTGTATGCATCAATTATACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTATCTGAGATTCATTGATGTTGTTCGAGGCCAAAAGCTTCATATGTGGAGAGGCGAATCTACTGAATCTAGTTTTCCTTCCCTTATTTCTGCCATTTGTTCCACTGGCTCTAACAAGATGCAAGCAGGTGGAATTTCTTCTTTGCCATCTTTTATAGCGGCTGGACTAAGTTCCGGTCATTGTAAACTGTTTGATGCAAAGAGTGGAAATGTCATTACCTCTTGGCGAGCTCATGATGGATATGTGACGAAGTTGGCAGCACCTGAGGAACATCTGCTCGTATCCAGCTCTCTAGACAGAACTTTGCGGGTCTGGGACTTAAGAATGAATTTTCCATTGCAGCCCGTAATTTTCAGAGGTCATTCAGATGGTATATCCAGTTTCTCCATTTGGGGCCATGATGTAATTTCAATTTCCCGGAGTAGGATTGGGCTTCTCTCCCTGTCTAAATCTGCCAATGAAACAGATGGGCAGCATCACATTATTCCCCAGAGACTCTACGTTTCTGATAACGGTCAGAGAAGCTTGTCAGCGCTTTCAGCCAATAATGTCCCTGCAAATCGTTCAGCTATTCAATCTTTTTTTCCATCTCCAGAGCTGCATTCCCAATTCCCGAAACATGTGTCAGCTAAAAATTTTGTTGCTGTGAGAAGGGGTATAATTGGTAAAACAGAAATGAGGTTGGATTGCAGGGAAGCTTATATTAAGCACATCGCATCGCCAATTGTTTAG 5097 0.4046 MEEESECFECLRLRIKSDFSEQVFFNYAISISAFPFGSSAIVNISGTADGEASSGQFILQYMPSRDKNCFINYVNECSLDSDEITTRSGDPDTGGSKDNNDVNGRTASSDDSDSGKAFSGNRNCSHSQRFSCLRTITSLAPIAHVGMSSHSTFQKVSSDFLSGLIEDHVLDSLDLFLEEKASGRDSVNFLSLIGLPSFEEDAFPGSLRHPNIAPVLALFKTSDHVNVVFPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALSYIHGLGVSHGNICPSNIMLTESLWSWLRLWNEPVLDCNLPLQESESGNSESARIGCCNVGCHSYGLYADLKLSPTIDCHACFQQWWRGEISNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYYDPQIFKSIHDGMADLAVPSWAESPEDFIKLHYDALESNRVSFQLHHWIDITFGYKMSGQAAIASKNVMLPLSEPMMPRSTGRRQLFTQPHPIRHATTKAKRHGSSKYAKVWSQATEMRRETYLLSQTAYLEELEQASKFSDHARHLNACYHYPINQMTGKNISYLGDPTTDTFSENISKLPLIDRNCQVPYKMNLISFLQHMKEEDEGSSGYPDLLLWKQKISSSRLCSEDVARDIFSIGCLLAELHLCRPLFDPISLSMYMADGTLPGFLQDLPPNIRLLVEACIQKDWMRRPSAKILLESPYFPKTIKSSYLFLAPLQLIAKDETRLRYAANLAKHRVFKEMGAFATEMCTTYCLPLIVNAVSDIEAEWAYMLLKEIMKCLTVQAVKTLILPTIQKILQTTGYLRLKVALLQDSFVREIWNQVGKQSYLETIHPLVLSNLYIAPDKNSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMMTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMDIAVLQVAASTLFGICQRIGADLTALYILPKLKELFDELAFSQEISKGSTTVDKNLKVGKTKIGGDLHIESRIDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIILARRPVISQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQSPVVVHEGMSHQMNNEPWYWFPSPSTIWDGPEFLGRVGVQKDDLPWKIRASVIHSIRAHHGAVRSLAINQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTNHSSAASKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHQLYSAETLVVGTGNGYLRFIDVVRGQKLHMWRGESTESSFPSLISAICSTGSNKMQAGGISSLPSFIAAGLSSGHCKLFDAKSGNVITSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNFPLQPVIFRGHSDGISSFSIWGHDVISISRSRIGLLSLSKSANETDGQHHIIPQRLYVSDNGQRSLSALSANNVPANRSAIQSFFPSPELHSQFPKHVSAKNFVAVRRGIIGKTEMRLDCREAYIKHIASPIV 1698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01069 1698 Gene3D - 1496 1655 IPR015943 GO:0005515
Spst10g01069 1698 Gene3D BEACH domain 339 579 IPR036372 -
Spst10g01069 1698 ProSitePatterns Trp-Asp (WD) repeats signature. 1548 1562 IPR019775 -
Spst10g01069 1698 PANTHER GH12955P 3 1636 - -
Spst10g01069 1698 ProSiteProfiles Trp-Asp (WD) repeats profile. 1530 1563 IPR001680 GO:0005515
Spst10g01069 1698 SUPERFAMILY BEACH domain 328 579 IPR036372 -
Spst10g01069 1698 SUPERFAMILY Protein kinase-like (PK-like) 206 289 IPR011009 -
Spst10g01069 1698 Gene3D Transferase(Phosphotransferase) domain 1 200 303 - -
Spst10g01069 1698 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1530 1563 - -
Spst10g01069 1698 SMART WD40_4 1296 1339 IPR001680 GO:0005515
Spst10g01069 1698 SMART WD40_4 1342 1379 IPR001680 GO:0005515
Spst10g01069 1698 SMART WD40_4 1523 1561 IPR001680 GO:0005515
Spst10g01069 1698 Pfam Beige/BEACH domain 348 560 IPR000409 -
Spst10g01069 1698 SUPERFAMILY Protein kinase-like (PK-like) 717 813 IPR011009 -
Spst10g01069 1698 Gene3D - 1274 1495 IPR015943 GO:0005515
Spst10g01069 1698 Pfam Protein kinase domain 205 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01069 1698 ProSiteProfiles BEACH domain profile. 335 605 IPR000409 -
Spst10g01069 1698 Pfam WD domain, G-beta repeat 1525 1561 IPR001680 GO:0005515
Spst10g01069 1698 Pfam WD domain, G-beta repeat 1344 1379 IPR001680 GO:0005515
Spst10g01069 1698 CDD Beach 348 579 IPR000409 -
Spst10g01069 1698 Gene3D Transferase(Phosphotransferase) domain 1 686 802 - -
Spst10g01069 1698 MobiDBLite consensus disorder prediction 84 125 - -
Spst10g01069 1698 SMART Beach_2 347 579 IPR000409 -
Spst10g01069 1698 SUPERFAMILY WD40 repeat-like 1299 1595 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01069 Spst-Chr10 11430054 11449026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01069 208 298 Receptor kinase-like Gene Family AT5G05160 36.364 3.99e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Spst10g01069 Beach 9.1e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01069 K17601 - gmx:100809116 2996.45