Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01065 ATGCAGCTTCTTCACTCCGACGAACCCGCGTCTGAGCGGCGCGATTCGCCGGAGAAGTCCGAGGATTCTAACACAGCCTCAGATTCTCTCGACTCCGGAACAGACGACGGCACGGCTGTAGACGTTACCGGAAAAAGCGTGGAGTTTCCGGCCGTGGAGATTGCCGAGGACTCTGCCGAGAGCCTCTACGTGTACAAGAACATGTACAGCCTTATTCCGAAGTCGGTTTCGCGTCTAGCGCGGTTGCGAACGCTGAAGTTCTTCGGGAATGAGATTAACCTGTTCGCGCCCGAGGTCGGGAACTTGACAGCGTTGGAGTGCTTGCAGATGAAGATTTCCTCGCCGGGGATTGGAGGCTTGCCGTTGCACACACTTCAGGGTTTGAAGGAACTCGAACTCTCCAAAGGACCTCCCAGACCTTCTGCTTTTCCCATTTTGACAGAGATTTCGGGTCTACAGTGCTTGACCAAGCTTTCCATTTGTCATTTCTCAATACGATACCTTCCTCCAGAAATTGGATGCCTGAAGAAACTGGAGTATCTTGATCTTTCATTTAATAAAATGAAGACGTTGCCAGCGGAGATTAGTTACTTGAGTGGCTTGATATCCATGAAAGTTGCGAATAATAAGTTGATGGAACTGCCGTCAGCTATGTCTACTCTGTCAAGACTGGAGAGTTTGGACCTGTCGAATAATAGGTTGACTTCGTTAGAGTCCCTTGAACTTGCCTCCATGCATAGACTTCAGAAGCTAAATCTTCAGTACAATAAGCTGCTCAGGATTTTTCAAATTCCTTCATGGATATGTTGTAATATGGAGGGAAATGATGAAGCTAGATGCAAAGATGATTGTAGCAGTTCTTCTGTTGAAATGGATCTCTATGAAAGCAACTTTCAGGAAAATGATGAAACCCATTCTGAGGGCCCTGACAATACCACATCAAGCATGCTAACAAGCTCCTCATCTAGCAGCAGATGTTTTGCATCCCGGAAGGCTGGTAAGCGGTGGAAAAGACGGTATTATTTACAGCAGAAAGCTCGTCAAGAGCGCTTGAACAACAGTAGGAAGTGGAAAGCTATAGATCATGATCAGTTGTTGAGCAAGAAGATTCACAGAATTTCTGAACCAGGAAATCGGGATAGTCTTGATTCTGAAACATGTGAAGAAATTGTACAAGAGAATGGGAACCTGGATGATAATAAAAGAATATTTTCTGAACAAGCAGTAAATGACAATGTAGTTGAGAATGTTAACAATGATGAAGTAATTATTGAGAAGCACTTTTCTGGGGAAGATTGCTGCACTACTGAAATCAAAGATGAAAAAGATGCATGCTTGTGCTCCTTAGAGAACAGGCAAAGTGAACAGGATGAAGTATCTTGTTTTGAACTTTTAGAATGTGTCTCTAAATCAAAGAGGCATTTAGATCGGGATCTTGATAATCCTAAACCGTGCAAGTCTAGAAAGTCTATCAATGATAGTTCATCATTGTCTGGCAAGTACAGCAGGATCTCATTTTGTGGCATTGAAGACCATCTATCAGATGGATTTTATGATGCAGGACGGGATCGGCCATTTATGCCTCTAGAGAATTATGAGAAAAATCAGTGTTTTGCTTCTCGTGAAGTCATCCTTTTAGACAGAAAAAAGGATGAAGAGTTGGATGCTGTTATGCTAGCTGCTCAGGCATTGGTCTATAATTTGAAGCAGTTAAATGGTTTAAACAGACATGGGAACCAGGATGTGGTTGATAACTTGCAGACAGCTTCACTGCTTGCACTCTTTGTATCAGATCATTTTGGTGGCAGTGATAGAGGAACTATTGTAGAAAGAACACGGAAATCTGTGTCGGGTTCAAACTATAACAAACCTTTTTTCTGTACATGCTCAGCTGGAAGCAGCACCAGTATAAGGGATTCCACTGAACCAGGTGTAAACACCATAGAAGATATCACTCTTTCTAAGATGTCAGAAAAATCTATTGACTCTATTAAAAGAAGACAAAATTCAATCATTGTTCCAATTGGTTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCATCAATTCCTTGTGAGCTTGTCAGGGGTTACTTAGATTTTTCACCACATGCCTGGAATATTATTCTGATTAAGAGAGGTGCTAAGTGGGTTCGAATGCTGATTGATGCTTGTCGACCTCTTGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTACATACCTCTTAATCGAACTACAATCCCTGTATCATCTAGAGGAATTCCAAGTTCTGATTATTCTTTTCCATCACTTACTACATCTGATGAACTTGAGACAAAGGCTTCAACTACTTTAGTTAAATGCAAAATTGGATCAGTTGAGGCTGCGTCAAAGGTGCGTACTTTGGCAGATCAAGGGAGTTCTGTTGACAAAATTAAAAACTTCGAGTATAATTGTCTGGGAGAAATTAGAATTCTTGGTGCTTTAAAGCACCCCTGCATAGTGGAAATGTATGGACACCAAATGTCATGTCAATGGTCTGTCTCAGCTGATGGTAATCCTGAACACCGTGTATTAAGATCTGCCATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTGGAGAAGCTGTCAGATTCTGGTAAAAAGCATGTTCCTGTGGAGTTGGCTTTGCATATTGCCAAAGATGTCTCATGTGCTTTGTCAGAGCTGCACTCAAGGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATTTAGATAGGAAGAGAGAGAATGGAGCTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCACTAAGATCAAGTTTACATGCATGTTGTATTGCTCAATTGGGAACACCTCCTCCCTGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGGTTATGCGGACTATGTACAAAAAAAATTCTTATGGATTGGAAGCTGACATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTTACTCTGCAAATTCCATATTCTGGGCTTCCTGATTCAAACTTCCTTGATAGTCTGCAGATGGGTACACGACCACAATTAACTGATGAGCTGGAGGCATTGAGTTCAACGGATGAACCCTCAATGATTCCGTCTGGTGAAGAGCTAGAGAAATCAGATGCGGAGGTTGACATGTTGAAATTTCTTGTTGATCTGTTTCTCAAGTGCGTAGAAGAAAATCCTAACAAGCGTCCTACAGCTGAAGAAATCCATAAAATGCTGCTTGCACACACACACACACAGGTCGTTTACAACTGTCCAAGTCTTCAGAGAGTTGTATCGTTTGTACATTTTCAAGGGGTTTGGTCCATGAGGCTCTACTGTAGTCTGGTTGAGATCGTTATATTGCAGCTAGATCTCTTTCGGATGATTAAGATCCGTATAACTGTAAAAAATGCAAGGAAACACAATGAAGATAGAGTTGGCAAACCATTTTATCTGGGACAGGTTGATGGCAAATGCTTACGAAAAAATTCAATGAAAGCGAAGAATGGAAATATCTTTTTGGCTTTAGATGCTGCTAAGCTTGCTTTACATGGGCTGGTGATCGTGCCTATTCCTTTTCTTTTTCTTGTCTCTATTTTTCTACCTCCTGACTTGGTTGGCAGTTTTTGCCACATTGGTTTAACTAAAGAGATTGAGACCCCAAATAACCAAATAGAACATGCTTTCCTCAAATCAAATGCGGACCACCTGTGCCCTCTGGCTTCGAGCCAGCCTGATCCGATTCGTGCTTCGGTTGTCTTTCTTTATTTCCTTGGTGGGGGTGATGGCAGTGAAATTCTGTCTTTAGGGTTCATGTTGATGTTGTTTGTTCTTTCTGGATTTCCTAAGGTGAGTGATGTCTACTAA 3927 0.4184 MQLLHSDEPASERRDSPEKSEDSNTASDSLDSGTDDGTAVDVTGKSVEFPAVEIAEDSAESLYVYKNMYSLIPKSVSRLARLRTLKFFGNEINLFAPEVGNLTALECLQMKISSPGIGGLPLHTLQGLKELELSKGPPRPSAFPILTEISGLQCLTKLSICHFSIRYLPPEIGCLKKLEYLDLSFNKMKTLPAEISYLSGLISMKVANNKLMELPSAMSTLSRLESLDLSNNRLTSLESLELASMHRLQKLNLQYNKLLRIFQIPSWICCNMEGNDEARCKDDCSSSSVEMDLYESNFQENDETHSEGPDNTTSSMLTSSSSSSRCFASRKAGKRWKRRYYLQQKARQERLNNSRKWKAIDHDQLLSKKIHRISEPGNRDSLDSETCEEIVQENGNLDDNKRIFSEQAVNDNVVENVNNDEVIIEKHFSGEDCCTTEIKDEKDACLCSLENRQSEQDEVSCFELLECVSKSKRHLDRDLDNPKPCKSRKSINDSSSLSGKYSRISFCGIEDHLSDGFYDAGRDRPFMPLENYEKNQCFASREVILLDRKKDEELDAVMLAAQALVYNLKQLNGLNRHGNQDVVDNLQTASLLALFVSDHFGGSDRGTIVERTRKSVSGSNYNKPFFCTCSAGSSTSIRDSTEPGVNTIEDITLSKMSEKSIDSIKRRQNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPSIPCELVRGYLDFSPHAWNIILIKRGAKWVRMLIDACRPLDIREEKDPEYFCRYIPLNRTTIPVSSRGIPSSDYSFPSLTTSDELETKASTTLVKCKIGSVEAASKVRTLADQGSSVDKIKNFEYNCLGEIRILGALKHPCIVEMYGHQMSCQWSVSADGNPEHRVLRSAIFMEYVEGGSLKNYLEKLSDSGKKHVPVELALHIAKDVSCALSELHSRHIIHRDIKSENILFDLDRKRENGAPTVKLCDFDSAVPLRSSLHACCIAQLGTPPPCVCVGTPRWMAPEVMRTMYKKNSYGLEADIWSFGCLLLEMLTLQIPYSGLPDSNFLDSLQMGTRPQLTDELEALSSTDEPSMIPSGEELEKSDAEVDMLKFLVDLFLKCVEENPNKRPTAEEIHKMLLAHTHTQVVYNCPSLQRVVSFVHFQGVWSMRLYCSLVEIVILQLDLFRMIKIRITVKNARKHNEDRVGKPFYLGQVDGKCLRKNSMKAKNGNIFLALDAAKLALHGLVIVPIPFLFLVSIFLPPDLVGSFCHIGLTKEIETPNNQIEHAFLKSNADHLCPLASSQPDPIRASVVFLYFLGGGDGSEILSLGFMLMLFVLSGFPKVSDVY 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01065 1308 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Spst10g01065 1308 ProSiteProfiles Protein kinase domain profile. 786 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01065 1308 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 105 1104 - -
Spst10g01065 1308 SUPERFAMILY L domain-like 58 273 - -
Spst10g01065 1308 MobiDBLite consensus disorder prediction 475 499 - -
Spst10g01065 1308 SUPERFAMILY Cysteine proteinases 679 737 IPR038765 -
Spst10g01065 1308 Pfam Ethylene-responsive protein kinase Le-CTR1 650 734 - -
Spst10g01065 1308 MobiDBLite consensus disorder prediction 1 41 - -
Spst10g01065 1308 MobiDBLite consensus disorder prediction 308 328 - -
Spst10g01065 1308 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Spst10g01065 1308 SMART serkin_6 778 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01065 1308 Gene3D Transferase(Phosphotransferase) domain 1 777 1118 - -
Spst10g01065 1308 Gene3D Ribonuclease Inhibitor 55 285 IPR032675 -
Spst10g01065 1308 SMART LRR_bac_2 221 240 - -
Spst10g01065 1308 SMART LRR_bac_2 175 194 - -
Spst10g01065 1308 SMART LRR_bac_2 198 217 - -
Spst10g01065 1308 SMART LRR_sd22_2 175 200 - -
Spst10g01065 1308 SMART LRR_sd22_2 221 242 - -
Spst10g01065 1308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Spst10g01065 1308 MobiDBLite consensus disorder prediction 299 330 - -
Spst10g01065 1308 SUPERFAMILY Protein kinase-like (PK-like) 798 1100 IPR011009 -
Spst10g01065 1308 Pfam Protein kinase domain 819 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01065 1308 SMART LRR_typ_2 245 271 IPR003591 -
Spst10g01065 1308 SMART LRR_typ_2 79 102 IPR003591 -
Spst10g01065 1308 SMART LRR_typ_2 175 198 IPR003591 -
Spst10g01065 1308 SMART LRR_typ_2 221 244 IPR003591 -
Spst10g01065 1308 FunFam Leucine-rich repeat protein kinase family protein 48 290 - -
Spst10g01065 1308 PRINTS Leucine-rich repeat signature 221 234 - -
Spst10g01065 1308 PRINTS Leucine-rich repeat signature 178 191 - -
Spst10g01065 1308 Pfam Leucine rich repeat 203 258 IPR001611 GO:0005515
Spst10g01065 1308 FunFam Leucine-rich repeat protein kinase family protein 824 1105 - -
Spst10g01065 1308 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01065 Spst-Chr10 11387049 11404091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01065 803 1095 MAP Kinase Kinase Kinase AT4G08500 34.007 5.47e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Spst10g01065 Pkinase 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01065 - - gmx:100811118 1920.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01065 10 11387049 11404091 Spst10g01065 10 11387049 11404091 ECH