Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01059 ATGGAAGATAATGGCTTGGTTTTGTTGTTCTATGTTGGCCACCGCAAGTTGAAGCTTCTTGTGTCTCCTATTCTGTTCATGCTCTTCCTTCTATCTCCATTTACTTTGCCCCTCAGCGAAGAAGGTTTGCGCTTTGTGGGGCAAGCATTAATAGCGATGAAGGCTACTTTCAGCAATATGGCAGACGTGCTTCTTGACTGGGATGACGTTCACAGTGACGACTTTTGCTCATGGCGTGGAGTTTACTGCGATAATGGCAGCCTTACTGTGATTTCTCTGAATTTGTCCAGCTTGAACCTAGGTGGGGAGATATCACCAGCCGTCGGGGACTTGGGAAACTTGCAATCAGTAGACTTGCAAGGGAATAAATTAACGGGGCAAATCCCAGATGAAATTGGAAACTGTGCCGCTCTTGTTCATCTGGATTTGTCTGATAATCAGCTTTATGGTGATATACCTTTCTCCCTTTCAAAGCTTAAGCAACTTGAGTTTTTGAATCTAAAGAGTAATCAATTGACGGGTCCTATCCCTTCAACTTTAACCCAAATTCCAAATCTGAAGACTCTTGATCTTGCTCGAAATAGGCTCACAGGAGAAATACCAAGATTACTCTATTGGAATGAAGTTTTACAGTACCTTGGATTACGAGGGAACATGTTGAGTGGTATTCTGTCCCCTGATATATGTCAATTAACTGGATTGTGGTATTTCGATGTGAGAGGCAATAATTTGACTGGTACCATACCTGACAGCATAGGAAACTGTACAAGTTTCGAAATCTTCGACATATCATATAATCAGATTACTGGAGAGATTCCATATAATATTGGATTTCTGCAAGTTGCTACTTTGTCACTTCAAGGCAATAGACTAACTGGGAAGATTCCAGAAGTGATTGGTTTAATGCAAGCCCTTGCAATATTGGATCTGAGTGAAAACGAGTTAGTGGGATCAATTCCTCCAATACTTGGCAATCTCACCTTCACCGGAAAACTGTACCTTCACGGAAACATGCTTACTGGCCCAATACCTCCTGAACTCGGCAATATGTCCAAACTGAGCTACTTGCAATTGAACGACAACCACCTAGTTGGTCAAATTCCAAATGAATTTGGGAAGCTAGAACATCTTTTTGAATTGAATCTTGCCAATAATCATTTTGATGGAACTATTCCACATAACATAAGCTCCTGCACTGCCTTAAACCAGTTCAATGTGCACGGTAATCAGTTAAGTGGTTCGATTCCATTGAGCTTCCGTGGCCTTGATAGTTTGACGTACTTAAACCTCTCCGCAAATAACTTCAAGGGGAATATACCCGTTGAGTTGGGGCATATCATTAATCTAGATACATTGGATCTATCCAACAATAATTTTTCAGGTCATGTGCCACCATCTATTGGTTACTTGGAACATCTCCTGACCCTCAACTTGAGTCACAACCACCTTGGAGGTTCTTTGCCAGCCGAATTTGGGAATCTCAGAAGCATTCAAATTCTTGATATGTCATTCAACAATCTGTCTGGTAGCATTCCTCCGGAAATTGGTCAGCTACAGAACCTTATGTCTTTGATTATGAACAACAATGATCTGCGTGGGAAGATTCCTGATCAGCTGACTAATTGTTTTAGTCTTACATTATTAAATTTGTCCTATAATAACCTTTCTGGAGTAATTCCCTCTATGAAGAACTTCTCTAGGTTTTCAGCCGACAGCTTCTTTGGAAACTCATTATTATGTGGAGATTGGTTAGGATCAATATGTCGTCCTTACATACCAAAATCAAGAGAAATTTTCTCGAGAGTTGCTGTTGTATGTCTCACGCTAGGAATTATGATTTTGTTAGCCATGGTCATTGTAGCCTTCTATAGGTCCAGCCAATCGAAGCAATTCAAGAAAGGATCTAGCAGAACTGGGCAAGGTTCCCCAAAACTAGTTATTCTTCACATGGATATGGCTATTCACACCTTGGATGATATAATGAGAAGCACAGAAAATCTGAATGAGAAATATATCATAGGGTATGGTGCCTCTAGTACGGTATACAAATGTGTTTTAAAGAATTCCCGACCGATTGCAATTAAGCGACTCTACAACCAACACCCACACAATTTGAGGGAGTTTGAGACCGAACTTGAAACAGTGGGTAGCATTAGGCATAGAAACCTTGTCACCTTGCATGGATATGCACTTACTCCCAATGGAAATCTTCTTTTCTATGACTATATGGCGAATGGCTCACTGTGGGATCTTCTACATGGTCCCTCGAAGGTAAAACTTGATTGGGAAACACGCCTGAGGATTGCTGTTGGAGCAGCTGAAGGACTTGCTTATCTCCATCATGACTGCAACCCACGAATAGTTCATAGGGACATAAAATCTTCGAATATTTTGCTGGATGAGAACTTTGAAGCTCATCTCTCCGATTTTGGCACGGCAAAATGCATCTCGACGACCAGAACTCATGCATCGACCTATGTCCTTGGAACTATAGGTTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCAGATGTGTATAGCTTTGGCATAGTTCTGCTGGAGTTACTTACTGGAAAGAAGGCAGTGGACAATGAGTCTAATTTGCATCAATTGATATTGTCCAAGGCAGATAACAATACTGTAATGGAGGCTGTGGATGCAGAGGTGTCTATAACCTGCATTGATCTAGCTCATGTTAAGAAGACATTTCAGCTTGCTTTGCTTTGCACGAAAAAGAACCCTTCTGAGAGGCCTACCATGCATGAAGTAGCCAGGGTTCTGGTATCACTACTCCCTTCACCTCCAACTAAAATCACTGCTCCACCTGCAAAGAAGTTTGACTACGCCCATTTTGTGATCGAGAAGGGACAACCACGAAAAGTGGAAGGACAACCACCTCAGCAGGATAACAACTCTACCAATGCTCAATGGTTTGTACGCTTTGGAGATGTAATATCCAAGAGCACTTGA 2985 0.4157 MEDNGLVLLFYVGHRKLKLLVSPILFMLFLLSPFTLPLSEEGLRFVGQALIAMKATFSNMADVLLDWDDVHSDDFCSWRGVYCDNGSLTVISLNLSSLNLGGEISPAVGDLGNLQSVDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDIPFSLSKLKQLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGILSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLTFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNHLVGQIPNEFGKLEHLFELNLANNHFDGTIPHNISSCTALNQFNVHGNQLSGSIPLSFRGLDSLTYLNLSANNFKGNIPVELGHIINLDTLDLSNNNFSGHVPPSIGYLEHLLTLNLSHNHLGGSLPAEFGNLRSIQILDMSFNNLSGSIPPEIGQLQNLMSLIMNNNDLRGKIPDQLTNCFSLTLLNLSYNNLSGVIPSMKNFSRFSADSFFGNSLLCGDWLGSICRPYIPKSREIFSRVAVVCLTLGIMILLAMVIVAFYRSSQSKQFKKGSSRTGQGSPKLVILHMDMAIHTLDDIMRSTENLNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPHNLREFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDYMANGSLWDLLHGPSKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISTTRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKADNNTVMEAVDAEVSITCIDLAHVKKTFQLALLCTKKNPSERPTMHEVARVLVSLLPSPPTKITAPPAKKFDYAHFVIEKGQPRKVEGQPPQQDNNSTNAQWFVRFGDVISKST 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01059 994 Gene3D Phosphorylase Kinase; domain 1 628 742 - -
Spst10g01059 994 Pfam Leucine Rich repeat 184 199 IPR001611 GO:0005515
Spst10g01059 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Spst10g01059 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 638 742 - -
Spst10g01059 994 SMART LRR_typ_2 374 398 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 111 135 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 183 207 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 302 326 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 231 255 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 159 182 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 494 518 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 470 493 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 422 446 IPR003591 -
Spst10g01059 994 SMART LRR_typ_2 350 373 IPR003591 -
Spst10g01059 994 SUPERFAMILY L domain-like 49 344 - -
Spst10g01059 994 Gene3D Ribonuclease Inhibitor 367 463 IPR032675 -
Spst10g01059 994 Gene3D Ribonuclease Inhibitor 46 208 IPR032675 -
Spst10g01059 994 Gene3D Ribonuclease Inhibitor 281 366 IPR032675 -
Spst10g01059 994 SMART serkin_6 667 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01059 994 ProSiteProfiles Protein kinase domain profile. 667 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01059 994 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 46 207 - -
Spst10g01059 994 Pfam Protein kinase domain 669 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01059 994 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 318 591 - -
Spst10g01059 994 Gene3D Ribonuclease Inhibitor 464 589 IPR032675 -
Spst10g01059 994 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Spst10g01059 994 Gene3D Ribonuclease Inhibitor 209 280 IPR032675 -
Spst10g01059 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 743 943 - -
Spst10g01059 994 Gene3D Transferase(Phosphotransferase) domain 1 743 942 - -
Spst10g01059 994 SUPERFAMILY L domain-like 325 581 - -
Spst10g01059 994 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Spst10g01059 994 SUPERFAMILY Protein kinase-like (PK-like) 645 932 IPR011009 -
Spst10g01059 994 Pfam Leucine rich repeat N-terminal domain 47 84 IPR013210 -
Spst10g01059 994 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 208 317 - -
Spst10g01059 994 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Spst10g01059 994 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Spst10g01059 994 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Spst10g01059 994 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 481 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01059 Spst-Chr10 11320852 11327967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01059 113 994 Receptor kinase-like Gene Family AT5G07180 77.010 0.0 1368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Spst10g01059 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01059 K20718 - gmx:100811653 1776.14