Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01046 TTCGATCTGTACAGAGAGCTCAACCATCCTGCCGACAAACATGGTGGTCCATCCAATTTCAACGTAACCTCCCTTGCTTGGAATAATATTACTTTAGATCAGTTCTTTTGGTACAAAAGAGGATATATTATTGAACAAGATCTAGTTTCGGGCCAAGAATCACTTAAGGGGAGTGATCCTGGACAGGAAATGGACGAAGAGAATCAGCGTATTATGTTGGCTATTTCAGACAATGATGAAAAGAAGATCATTCGTAGGGAAGTTGAAAAGAAAAGGAGGACAAAAATGTCTGCTCTAGGTTCATCTCTCCGCTCTTCACTCCCTCTTGAACTCATCAAGGGAAAGCGTTCGGCATCAGATCAAATAGGAGTGGCTGTAAATTATATACAAAGTTTAAAGCAGAACATTAGTGCTCTCCAAGTTAAGAGAGATAGCCTCAACCAGATGATTCAAACTGAAACTAAACAAGATCATTCAGGTGAAGTAGTGAAGAGTGTCAACATCAATCTCATTCCAGGGGGAGTGGAAATTTCCATATGTAGCGGTTTCGAGGAGGGAAGTTCACTCTCTGAATTAATGGAAATACTGCTTCAAGAAGGATGTGATGTTGTTACCAGTGTTTCCAACCATGCTAATGGAAGGGTATTTCATACTATTAACTCTCAGGTGGAGGACATGACACGCCTTGATGTTGCTAAGCTGCAACACAAACTGGATCATGCAATCTTATTGCCAAGGACAACTATTCAGTTTGCCTTTGTTCATTTGAATTTCTGCTTGTCCTTAATCTTCCTATTTCTTTACCCTAACGCTCCTGTTTTCAATCTCACCTACATAGTTGAAAGGTAA 849 0.4016 FDLYRELNHPADKHGGPSNFNVTSLAWNNITLDQFFWYKRGYIIEQDLVSGQESLKGSDPGQEMDEENQRIMLAISDNDEKKIIRREVEKKRRTKMSALGSSLRSSLPLELIKGKRSASDQIGVAVNYIQSLKQNISALQVKRDSLNQMIQTETKQDHSGEVVKSVNINLIPGGVEISICSGFEEGSSLSELMEILLQEGCDVVTSVSNHANGRVFHTINSQVEDMTRLDVAKLQHKLDHAILLPRTTIQFAFVHLNFCLSLIFLFLYPNAPVFNLTYIVER 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01046 282 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 238 - -
Spst10g01046 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 80 132 IPR011598 GO:0046983
Spst10g01046 282 Coils Coil 129 149 - -
Spst10g01046 282 Pfam Helix-loop-helix DNA-binding domain 85 133 IPR011598 GO:0046983
Spst10g01046 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 152 IPR036638 GO:0046983
Spst10g01046 282 Gene3D - 74 159 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01046 Spst-Chr10 11189740 11192991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01046 70 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 34.239 1.34e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01046 - - gmx:100776724 266.159