Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01043 ATGAGAGGGCACACAGTGGTTACTGCGGTCTCCGTCATTCTCATGTATGCAGCCATAGTTGCTAACTCAGCTATGGACCCCTACAAGGCCCTCCACATTATCCTCAACCCAAACGGCACCCTCACACGCTTAAACATTTCTCCGCAAAGTCCTCCCTCACCAGATCCCACCCTTCCCACCCCGGTTGTTTCCAAAGATCTCACCGTCAACAAATCCAAGCACACATGGGTGCGGATCTACCTACCCCACAAAGCACTGGATTATTTCCCCAACTCCAAACTACCCCTCATCGTGTTCTACCATGGCGGGGGCTTCATCTTCGACAGCGCCGCCTCCACTTACTTCCACGACTTCTGCGTCAGAATGGTCCATGCCACGCAATCCGTCGTCGTGTCAGTCGACTACCGCCTCGCACCGGAGCACCGCCTTCCCGCTGCGTACGAAGACTCCGTGGAGGCACTGCACTGGATCAAAGCCTCCAACGACCCCTGGTTGCGCCACGCCGATTACTCCCGCTGTTATCTCATGGGGGAGAGCGCCGGAGGGAACATTGCCTACACCGCAGGTCTACGTGTAGCCGCGGAAGTTGATAAGATCAAACCGCTGAAGATTGAAGGGTTGATATTGATTCAACCGTTTTTTGGTGGGACCAAGAGGAGTCCATCAGAGATAAGGCTAAGCGAGGATAACACAATACCTTTGCCTATCACTGATCTGATGTGGAATCTGTCGCTGCCCGTTGGCGTTGACCGTGATTACAAGTACTCAAATCCAACGGTCAATGGTGGGGATAGGATTTTGGATGAGATTAAGGTTCTTGGGTGGAGGGTTGCGGTGTTTGGGTGTGAAGGGGACCCACTGGTGGACCGTGAGAGAGAGTTGGTGAAGCTGCTTGGGCACAAGGGTGTGCACGTGGTTGGGAAGTTTTATGAAGGGGGTCGACATGGCATCTTCGTGGGTGACCCTTCCATGTCTGTCAAAGTGTTTGATCTAGTTAAAAAGTCTCCGATCATGTGA 1017 0.531 MRGHTVVTAVSVILMYAAIVANSAMDPYKALHIILNPNGTLTRLNISPQSPPSPDPTLPTPVVSKDLTVNKSKHTWVRIYLPHKALDYFPNSKLPLIVFYHGGGFIFDSAASTYFHDFCVRMVHATQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKASNDPWLRHADYSRCYLMGESAGGNIAYTAGLRVAAEVDKIKPLKIEGLILIQPFFGGTKRSPSEIRLSEDNTIPLPITDLMWNLSLPVGVDRDYKYSNPTVNGGDRILDEIKVLGWRVAVFGCEGDPLVDRERELVKLLGHKGVHVVGKFYEGGRHGIFVGDPSMSVKVFDLVKKSPIM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01043 338 Pfam alpha/beta hydrolase fold 97 318 IPR013094 GO:0016787
Spst10g01043 338 Gene3D alpha/beta hydrolase 28 335 IPR029058 -
Spst10g01043 338 PANTHER ARYLACETAMIDE DEACETYLASE 34 311 - -
Spst10g01043 338 SUPERFAMILY alpha/beta-Hydrolases 37 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01043 Spst-Chr10 11170260 11171276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01043 49 308 Carbohydrate Esterase AT1G68620 40.794 1.32e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01043 - - var:108324928 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01715 4 57086330 57087448 Spst10g01043 10 11170260 11171276 PCT
Spst10g01043 10 11170260 11171276 Spst4g01713 4 57065458 57066453 PCT