Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01042 ATGTTTGTGTCTAGCCAAGTCGATCCCTTCAACCATCTCAAAATCATCCTCAACTCGGATGGCACCATCACTCGCCTCCGTCAAGACCCACACACCCATCCCGCACCCGATCCCACCCTCCCCATCCCCGTCCTCACTCAAGACGCAACCATCAACCAATCAAACCGAACCTTCGCCCGCATATTCCTCCCGCGGTCAGCACTCCACAATTCCTCCACCAATCTCCCTCTAATCGTTTACTTCCACGGCGGCGGCTTCATCCTCTTCAGCGCCGCCTCAGACTTTTTCCACGATGCCTGTGTAAGCCTCGCAAACGACACCAATTCCATCGTCGTTTCCGTGGACTACCGCCTCGCCCCGGAACATCGACTCCCCGCGGCGTACGACGACGCCGTCGAAGCGCTTCACTGGATCAAATCCCGCCCACACGATTGGTTGACTAACCACGCCGACTATTCCAACTGTTATCTCATGGGAAGTAGCGCCGGAGCGAACATCGCGTACCACGCTGCTCTACGTGTGGCCGCGGGAACTAACTCTGATGGGATTAATTACCTGGAGCCACTTAAGATCCGAGGGCTGATATTGAGTCAACCCTTTTTCGGGGGCACAGAGAGGGTTCCTTCTGAGGTGAGGCTTGCGGAGGATCCGGTTTTGGCGCCGCACGTGTGTGACGTGCTATGGAAGTTGTCGTTGCCCGTTGGGGTCGACCGTGAGCACGAGTATTGCAATCCTCGGGGAGGCGATGGGGCTGTGGTTTTGGAGAGGGTGAGGGAGCTGGCGTGGCGCGTGGTGGTGAGTGGGTCCTATGAGGATCCACTTGTGGATCATCAGATTCGCCTGGCCAGACTCATGGAGGAGAAGGGTGTAGCCGTCGTCACCAGTTTTAACCCTACCGGAAGTCATGGGGCTGAGGTTCGTCATCCTCTGCACCAAAAGCGACTCCACCACCTTCTCAAACATTTTATTGCTTCTTCTTCCTCCTCCCTCCTTCCATGA 999 0.5636 MFVSSQVDPFNHLKIILNSDGTITRLRQDPHTHPAPDPTLPIPVLTQDATINQSNRTFARIFLPRSALHNSSTNLPLIVYFHGGGFILFSAASDFFHDACVSLANDTNSIVVSVDYRLAPEHRLPAAYDDAVEALHWIKSRPHDWLTNHADYSNCYLMGSSAGANIAYHAALRVAAGTNSDGINYLEPLKIRGLILSQPFFGGTERVPSEVRLAEDPVLAPHVCDVLWKLSLPVGVDREHEYCNPRGGDGAVVLERVRELAWRVVVSGSYEDPLVDHQIRLARLMEEKGVAVVTSFNPTGSHGAEVRHPLHQKRLHHLLKHFIASSSSSLLP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01042 332 Gene3D alpha/beta hydrolase 10 329 IPR029058 -
Spst10g01042 332 PANTHER ARYLACETAMIDE DEACETYLASE 16 305 - -
Spst10g01042 332 Pfam alpha/beta hydrolase fold 78 303 IPR013094 GO:0016787
Spst10g01042 332 SUPERFAMILY alpha/beta-Hydrolases 26 309 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01042 Spst-Chr10 11168777 11169775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01042 15 245 Carbohydrate Esterase AT5G16080 40.417 4.32e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01042 - - pvu:PHAVU_007G064700g 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01042 10 11168777 11169775 Spst10g01042 10 11168777 11169775 ECH
Spst4g03092 4 70289323 70290312 Spst10g01042 10 11168777 11169775 PCT
Spst10g01042 10 11168777 11169775 Spst4g01715 4 57086330 57087448 PCT