Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01035 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAAAGGGGTGGAGAAGCTCAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCCTTCGATTTTCATCCATTTCACTTTTCCATCAACCACCAACAATCCTCTTTCAAGTCTAGCACCGCAGAAGACCAAACTATCCCCAAAGGAGCTGAAGGACCAAGGAGTAGCTTGGAGTCAGAAGATGGTACTACAGTGTCATCAACCTCAAAAGAAGAAACTTTAAAAATACCAAAGAAGATTCGGATCAAAACAAGAGGGAGCACAAGATCAAAAACAGAAAGTTTTAGCGATCTTTCCTCAGAAATAAGTGTCTCTCCAGGGACCAAGACACCAACTTTGGTTGCGAGGTTGATGGGTCTTGATCTTCTTCCTGATGCACATTCCTCTTCTTCCCCATGCCTTTCCACTCCAAACCTTCATAGACAACGGCAGCACATAAAAATAATCAAACATAGAAACAGCACAGGAAGTGACTTCTTGCCTGAGACTCCTAGAATGTTCTCTGCAAGAAGATCAGATGTTGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAACAGAGTCCCTTACGAGGATTTTGAGGTTCCTCTTTCATTTTCAAAGAGAAAATACGATGAGAACAATAGCAGGAGCCCAAGCCACTATGCCAGGCAAATTGTCAAACAGGTTAAAGAAAGTGTGAGCAGAAAGGTTGGACGTGACATCACCAACACTGCCAAGAACAGAGAACAAGGAAAAGAGGAATGCGTAAGCCAATTCAAATTCAAGAAATCTCCTAAAACTTCAGTGAATGAATCCAGCCCTGGAAAACTCTCAAACCCGTCTTACTCCCCAAGGCTCAGCAGATTCATTGACACCAAACAAAAACCGAGCACAACACCATCACCAACTACTCCAAAAAATCAAAGTACACACTCAGTGCTAAAACCGCCGTCACCTCCACCTGCGATCAACATTGATACACAGCTCTCAAAAGTTTCCACGAAGCCAAAGCCTCAAGCATTGCCCGATAAAGGGTTGCAGAACCAAAGAACAGTCACAAAATGCAAGAAAACCACCATTGGAGAGTCGAGTTCCAGGGTCAAGAAGCCTCCACAAACATCAATCAGAAACAAGCAAGAAGAACCATTTATTATCCGTCCCCCATCAGCCTCTAAAGCCAATGACATCAAAACAAAAAACAAGAGAACTCATCCACTTTCAAGCGATCTTCTTAGTAACCTCAACACGGTTCCAAATCTTCTCCCTCTCAGGACAGGCCTTTCTCCTCAAAAACAGACGCAGGTGAGTGATGATCATGATTCTCGAGATGCAAAATGCAGCACACGGTTATTTAGTTGTTCGCGCCAGACGTACAAAGAAGAAGCGCCACGACCACCCCCACCCCGAGGACCAATGACCAGCGATCACGACAAATTTCACGGCGCCTTCACCACCACACCTTCCGCCGCACTCCAGGAAGGGCCAGAATTTAACTACGTGACAACCATATTGTCCCGCACCACTGGGTCCCACAGCAACTCCACCACGCTTATACCCCACCTCCATTTTCAGTGGTTCTCTCCCACCCACCCCTTGGACCCTTCCGTCTTTCACCATCTGGAGCGCTACCCAACATCCCATTCCTTTGTCTCCTTCCAAGACGACAACAAAGATTGCGTCTTTGAGCGGAAACACCATCTGGGTCCCCGCTGCAACCGCAGATTACTCTTCGATTTGGTCGACGAGTTGCTGTCGGAGATTCTGGTTCGGCCGAAGCGTTACCGAGGGACGCTGTTGGAGACGGTGTGGGAGAGGATTCGGAGTTTGCCACGTGCGAAGTGCGAGGTTTTGGAGGACCTAGATGAGTTGGTAGAGATGGAGGAGATGAGGGAAGAAGAGGAAGGAGAAGGGTTAGTGAAGGAGATAGAGGGGAGCATAGTGGAGTGGTTGGTGCATGAAACGTTAACCGTTATGGTTGGGGGCGTGGAATCGTAG 2019 0.474 MGKEWHWGGRSSKRGGEAQTEIPSGCMCAVFQAFDFHPFHFSINHQQSSFKSSTAEDQTIPKGAEGPRSSLESEDGTTVSSTSKEETLKIPKKIRIKTRGSTRSKTESFSDLSSEISVSPGTKTPTLVARLMGLDLLPDAHSSSSPCLSTPNLHRQRQHIKIIKHRNSTGSDFLPETPRMFSARRSDVEHRLSLQINKENRVPYEDFEVPLSFSKRKYDENNSRSPSHYARQIVKQVKESVSRKVGRDITNTAKNREQGKEECVSQFKFKKSPKTSVNESSPGKLSNPSYSPRLSRFIDTKQKPSTTPSPTTPKNQSTHSVLKPPSPPPAINIDTQLSKVSTKPKPQALPDKGLQNQRTVTKCKKTTIGESSSRVKKPPQTSIRNKQEEPFIIRPPSASKANDIKTKNKRTHPLSSDLLSNLNTVPNLLPLRTGLSPQKQTQVSDDHDSRDAKCSTRLFSCSRQTYKEEAPRPPPPRGPMTSDHDKFHGAFTTTPSAALQEGPEFNYVTTILSRTTGSHSNSTTLIPHLHFQWFSPTHPLDPSVFHHLERYPTSHSFVSFQDDNKDCVFERKHHLGPRCNRRLLFDLVDELLSEILVRPKRYRGTLLETVWERIRSLPRAKCEVLEDLDELVEMEEMREEEEGEGLVKEIEGSIVEWLVHETLTVMVGGVES 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01035 672 MobiDBLite consensus disorder prediction 50 122 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 239 268 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 1 20 - -
Spst10g01035 672 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 669 - -
Spst10g01035 672 Pfam Domain of unknown function (DUF4378) 504 661 IPR025486 -
Spst10g01035 672 MobiDBLite consensus disorder prediction 431 499 - -
Spst10g01035 672 Pfam DUF761-associated sequence motif 113 143 IPR032795 -
Spst10g01035 672 MobiDBLite consensus disorder prediction 103 122 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 71 85 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 352 387 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 269 321 - -
Spst10g01035 672 MobiDBLite consensus disorder prediction 239 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01035 Spst-Chr10 11030173 11033334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01035 94 664 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.704 1.21e-48 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01035 - - vun:114190841 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01035 10 11030173 11033334 Spst10g01035 10 11030173 11033334 ECH
Spst4g03100 4 70376324 70379647 Spst10g01035 10 11030173 11033334 PCT