Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01034 ATGCTTTACTGGATTCAGCAACTGAAGTTAGAATCCGCAAGCATGGCAAAGAAGATTGAGCTTCTTGAAAATTCTAAAAGGAAGCTGCTGGGACAAAGCGTGAGTTCTTGTTCCTATGATGAACTCAAAGAAATTGAGGATCAGCTGCAGAGAAGTTTGCTAAGAGTCAACCAGAAAAAGGCTCAACTATATATGGAGCAGATTGGTCAACTACGATCCCAGGAGAGTAACATGCTCGTAGAGAATGCCAAATTAACTGAAATGTGTCAGAGGGTGGAAAAGACATCCCAACAGCAATGGCCTAGACACTCACAAGTTGAAACAGAAGCAGAAGCAGCACCTAGCTGTTCTAGTAGCCAGCGTTTAGAAGTGGATACAGAATTATTTATTGGACTGCCAAAGCAGGGTTGCTAA 414 0.4251 MLYWIQQLKLESASMAKKIELLENSKRKLLGQSVSSCSYDELKEIEDQLQRSLLRVNQKKAQLYMEQIGQLRSQESNMLVENAKLTEMCQRVEKTSQQQWPRHSQVETEAEAAPSCSSSQRLEVDTELFIGLPKQGC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01034 137 Pfam K-box region 6 89 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst10g01034 137 Coils Coil 5 25 - -
Spst10g01034 137 ProSiteProfiles K-box domain profile. 5 91 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst10g01034 137 Coils Coil 39 62 - -
Spst10g01034 137 MobiDBLite consensus disorder prediction 95 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01034 Spst-Chr10 11013271 11020553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01034 6 133 MADS-box Gene Family AT4G22950 37.121 7.16e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01034 - - pvu:PHAVU_007G065500g 196.823