Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01029 ATGGAATCGAATCCCACCCACGGCGGCGGCGATGACACCTCTGAGACGCCACCTCCGCCGCCAACAGTGGACCCGCTGGAGTCGTTGTCACCGTCTCCGCCGCAGACGCTACAAATGAAGGAAGAGGCCATGGACGCGGAGCAAGGCGGTGACGTGCCACCTCCAATGAACGTTATTCCGATGCCGGCGGTGAAGCGGCCATCAAAGGACCGGCACACGAAGGTGGAGGGGCGAGGTCGAAGAATCCGGATGCCAGCGACTTGCGCGGCGAGGATCTTTCAGCTGACGCGCGAGCTGGGGCACAAATCCGACGGAGAAACAATCCGGTGGTTGCTCGAGCATGCTGAACCTGCGATCATCGAGGCCACCGGAACCGGAACAGTTCCGGCTATTGCAGTATCGGTCGGCGGCACTCTCAAGATTCCGACATCCTCGGCGGCGAGACCCGACGGAGGAGACACCCCAAAGAAGCGAAGGAGGAGAGCGTCGAACAGCGAATTCATCGACGTGAACGAAAACCACGTTTCGGTGTCTTCAGGGCTGGCACCAATCGCGCAAACCGCGTATGGCGGTGTTGCGGGTGGTGGTGGTGGGGGAGTAGTTCCTCTGTGGAATGGTAGCGCTTCAGGGCCTTTCTTCATGTTTCCAAACGCTTCAAACCCGCCTCAGTATTGGGCCATTCCAGCAACCGCGGCCCCGTTTTTTAACATGCAGGCCCGGCCCATTTCGGGGTTCGTTTCTGCCTTGCAGATGCATCAACAGGATAATCACTCCTCAAATGGTGCTGCCTCCGATTCTGTTAACTCTTCGTCCACTCTGCCTTCTAATATGACCTCGGTGAGTGTCACCACTACTGCTGCTACTGCCTCCTCCTCTTCCACCTCCTCCTCCGCTGCTACAACCACTCAAATGCTCAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTCCAGTTTTTGGGTCAAGCGCCACCTTCTTCAAAGCCTTGA 993 0.572 MESNPTHGGGDDTSETPPPPPTVDPLESLSPSPPQTLQMKEEAMDAEQGGDVPPPMNVIPMPAVKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGGDTPKKRRRRASNSEFIDVNENHVSVSSGLAPIAQTAYGGVAGGGGGGVVPLWNGSASGPFFMFPNASNPPQYWAIPATAAPFFNMQARPISGFVSALQMHQQDNHSSNGAASDSVNSSSTLPSNMTSVSVTTTAATASSSSTSSSAATTTQMLRDFSLEIYDKKELQFLGQAPPSSKP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01029 330 MobiDBLite consensus disorder prediction 141 164 - -
Spst10g01029 330 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Spst10g01029 330 MobiDBLite consensus disorder prediction 14 28 - -
Spst10g01029 330 Pfam TCP family transcription factor 68 147 IPR017887 -
Spst10g01029 330 MobiDBLite consensus disorder prediction 1 78 - -
Spst10g01029 330 MobiDBLite consensus disorder prediction 250 278 - -
Spst10g01029 330 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 49 316 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01029 Spst-Chr10 10994848 10995840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01029 62 321 TCP Transcription Factor Family AT5G51910 55.019 8.60e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst10g01029 TCP 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01029 - - gmx:100819475 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01029 10 10994848 10995840 Spst10g01029 10 10994848 10995840 ECH