Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00969 ATGGTTAGCCAAAGGCAGCGACTTGCTCGGAAGCGATTCAAAGCGGAGCACCCTGAACTGTTTCCCAATCCCGAGCCCACACCCCCGAAAGATCCTAACAAGAAGAAGAAGAAGAGTAGTGCGTTCAAGCGCAAAAGGGCCGAGTCCAAACCCGGCTCCTGGAAGAAACACCCACTTAGAGTTCCCGGCATGAAGCCCGGCGAGAGCTGCTTCATCTGCAAGGCCAAAGATCACATCGCCAAGCTCTGTCCCGAAAAGGTTGAATGGGAAAAAAACAAGATATGTTTGCGGTGTCGTCGACGTGGTCATAGAGCTAAGAACTGCCCTGAGGTGCAAGAGGCCGCCAAGGATGTCAAATATTGCTATAACTGTGGGGAAACTGGTCACTCTCTAACACTGTGTCCGCACCCCCTCCAGGAAGGAGGGACAAAGTTTGCTGAGTGCTTTGTCTGTAACCAACGTGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAAGGGTGGTTGCTGTAAAATATGTGGTGGTGTCACACATTTGGCAAAAGATTGTCCCGACAAAGGAAGGCAAGGATCTGGTGCTGCTAATGGCCCTGTTGGTAGATCAACGAGAATTGAAGAGAGGTCCAGGGGCAAGGTTACCAAATTTATTAGCGGGGATGATATTGAGGATGACTTCATGGTAGATGACATACATAGTGGCAACAATAACAAGTCAGCAAAGTCAGAAGATGAAATTGCAAAACCAAAGAAGAAGGATCCTAAAGTTTCTGATGCTATGACTGTGACCGATAGCCATGACGGCACGCTGAGCCAGATCTCTGACAGTAAGCAGTGCAGAGAGGGGGAGAATCCTCAAACGCTCACTTCTCCGGAACATGGAGGCACTGATAAAAGGAAGAAAAAGAGAAAGAAGAGAAACGACGAATCAAACGAACAGTCCCAGATTGAGGTATGCCCTAAACCCTTAGTAGACTTACTGTTGTTTCAAGAGGAAAATGGTGTAGCCGCTCTAGATAATCCTAATCCAATCTACAATAAGAAGAAAACTAAAAATTTGCATGGTGAACAACAGCTTCACCCATCTAACTCTTCAATTGGGATTTGTGTGGTATCTGATGACACGCAGGGGGAAGAAGCACGACAAGGTGATGCTAATGGGAATAGGGGTTTGTGCCCTAATCCCTTAGTGGACAGACCAATCCCAATTGCTCCACGAGAGGAAAATGGTGAGGCTACTGCACAGAATCATTGCTCAATCCCCAAGAAGAAGAAGAGCTTGCCAGTTGCTGAACAGATATGTGACTCTTCAATCCTGATAGGTGTGGAACCTGGTTTTACGAGGGAAAAGGGATCACGACAAGGTGATGCCAATGGGAATGGGATTTTGTGCCCTAAACCCGTAGTTACACTAAATCCAATTGTTTCTCATGAGGAAAATGCTAAAGCAACTGCACAGGACCATAACTCAATCCTTAAGAAGACTTTGCCAGGTGCTGAACAGATATGTGACTCTTCAATCCTGATAGGTGTGGAACCTGGTTTTACGAAGGAAAAGGGATCACGACAGGGTGATGCCAATGGGAATGGGGTTTTGTGCCCTAAACCCGTAGTTACACTAAATCCAATTGTTTCTCATGAGGAAAATGCTAAAGCAACTGCACAGGACGATAACTCAATCCTTAAGAAGAAGACTTTGCTAGGTGCTGAACAATTATGTGACCCTGGTGATAATGGGAATGAGGGTTTTTGCCCGAAAACCTCAGTAGACACACAGCTCCCAATTGTTCCCCGTGAGGAAAGTGCTGAAGCAACTGCACAGAACCCTACTCCAAACCCCAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGTTTGCGAGGTGCAGAGCAAATGTGTGATCCTTCCGTCCAAATAGGTGTGGAACTTGATGTTAGGCGGGAGGAAAGAGAACAACAAGGTTCTGAAACAAGTACACAGAACCCTAACGCAACTCCCAAGAGAAAGAGGAGGAATAATGTGGAAAATGAACTACAGCAACTTCAGACATGCGACCCTTCAATCCCGATCTATGTAGAACCTGAAGTTAAAAAGGGAGAAGGAGCACATCGAGGTGATGCTAATGAAGCTGGAATATCAGGAATAAATGAAGAACGCCTTGTACCTGATGCTACAGCCCCAGAAAACACGCACTGGAAAAATGATTCCTCCGGGAAAAAGGAGAAAGTGTTTAAGCCTGACTGTTCTCAACCTGAAGTGGTACTCCAGTTAGACACAGCAACCCCTTCTGACCTAGAACTTAAACAAAAGGCACAACCGATTGAAGCTAAGATAGAGTATCCTCAAACGAGTTTACGTGCACAACACACTCAACCTCAACCTTCTTCTAACCATGCACCTGCTGTTCGAGGAATAAATGAAGAATGCCCTGCACCTGATCCAGCACCCCTGGAGCACACTCATCAGAAAAAGAGGACGAGGAAAAAGAAGAGTGTGCTTAATCTCCCACGGGTTGAACTACAACTAGAACCAGAACCAAAACCAAAGGAGTCCAATAATACAGAGCACCCTCAACAATGTACGCCCTATTTAGAACTGAAAGTTATGGTAAAAATAGGTGCAGAAGCCAATGTAGACCACTCTCAAGTGTGTCCTCAACCTGAATTGGCTCCCCCATTAGATATAACAACTCCTAATGTCACAGTGGTGGAAAAAAGGGTAGAACTAACTGAAGCTAATGTGGAGAATCCTCAAGCATGTTCTAAACCTGAATTAGCATCCCTGATAGATCTTCCAGCTCCAACAGGCCCAGAAAAGAAACAACAGGCATATCCTATCAAAATCCCAGAAAAACATACTCAACTCCCCAAATCTCAACCTTGTGCAGAGCCTCTGGTCGATTCAACAACTCCAATTGATCTAGGCAGAAGAGAACATACAAATAAGAGGGTAATAGAAAAAATAATGTGCTCAGAAGAGAAGGTGGGAAACCATGGAAGCCCATTACATATGGACATAACCCTCAACCTGGCCCCAGACCCGGGACAGCAAGACCCAGCATCCTCATTAAGCTCACAACCTGTATCCCTGACAGATCAAGCAATCCCAGTGGATCCAGCAATCCCAATAGACTCAGAGCAAAAGATGAAGAAGAAAATAAAGCAAAGGGAGACTGTGGTGGTGGGGGAAGAAGAGCCTAATCATAATAAATGTGATACAGAGCAGCCAAAAGTGACAATTCAGAAATCTACATTTATAGAAGCACCCCCAATAGATCCAACAATTAAAATGGACCATTGCCTTGCAGTCCCAATGTGCCCAACAAACTCAACAGACATAAAACAAGAGATCTCAAAGAAAAATAGGAAGAAGAAAAGGAAAGGAGGAATGAGGGCAGAAAAGAAAAAAGAGACGGAACCGAGTGAAGCACATGTACAACATCCTCAACCTTCTATCCATGAACCTGCTGTCCGAGGAATAAATGAAAAATGTCCTGCACCTGATCCAGCACCCCTGGCGGGCCCACACCCAAAAAAGAAGAGGAGGAAAAGGAAGAGTGTGCTTAATCTCCCACGGGTTGAGCTACAACTAGAACCAGAACCAAAGGAGTCCAATAATATAGAGCACCCTCAAGAATGCACCTCCTCTTCAGAACTAAAAGTTACGGTGAAAATAGGCACAGAAACCAATGCAGACCACTCTCAAGTGTGCCCTAAACCTGAATTGGCTCCCCCATTAGACATAGCAAATCCTAATGACACAGTGGTGGAAAAAAGGGCAGAACCATCTAAAGCTAATGTGGAGGGACCTCAAGCGTGTTCTAAACTTAAATTAGCATCCCTGATAGATCTTCCAGCCCCAACAGGCCCAGAAAAGGAACAAGAGACATATCCTTTCAAAATCCCAGAAGAACATACTCAACTCCCCAAACCTCAACTTTGTGCAGAGCCTCCAAGTGATTTGACAACCCCAAATGATCAGAGCAGAAGAAAACAGAAAAATAAGAGGGTAATAGAAAAAATAATGTGCTCAGAGGAGAAGGAGGTGAACTATGGAAGCCCATTGCATATGGACATAACCCTCAACGTGGCCCCAGACCTAGTCCAACAAGACCCAACAACCCCATTAAGCTTACAACCAGCATCCTTAATAGACCAAACAATCGTGGTGGATCCAGCAATCCCAACAGACGCAGAACAAAAGATGAAGAGGAAAATAAAGCAAAGGGAGACTGTGGTGGAGGGGGAAGAAGAGCCTAGTCATAATAAATGTGATACAGAGCAGCCAAAAGTCACAATTCAGAACTCTACATGCCTTATAGAAGCACCCCCAATAGACCCAGCAATTAAAATGAACCATTGTCTTACTTTCCCAATGTGCCCAACAAACTCAAAAGATATAGAACCGGAGATCTCAAACACAAATAGGAAGAAGAAAAGGAAGAGTGCACGCAAAAGTGAAGTGGCTGAAGCCAATAAACAGAACAGTGAAGCGGCAGAACCCAATGAACGCAATGGCAAGCTCAATGAAGTCCCATCTGGGGCCTCAGCTCAACAATTTGTATACCCTATAACAGTACCCTCAAATGACCAAATAAACTCAATAGGCGCAGCTACCCTTATAGACACAACAACCCCAATAGACCAAGGTCAGGAGATGACCAAGAAAAAGAGGAAGAAGAAGAGAAATAGGAGATCGCACATAAATGAAGGGGCTGAACCCAATGAACCAGATGACAAACAACCTGAAACCGCAGTCCAGGGATTTGTATATCCTATAGTAGCACCCTCAATGGACTTAACAATCTCAGCCCAACCTTTGCCAATAGACACAGTAACCCCAATAGACCAAGATAAGAAGACGTGTAAGGAAAAGAGCAAGAGGAGTGCCCTTATAAGCGAAGGGGCAGAGCTTAATGAACATGATGGAAAACCAGCTGAAACCCCAGTTCAGCAATCTATATATCCTATAGCAGCTCCCTCAATAGAATCAGCAATTCCAACAGGCCAAGCTCCCCAAATTGACCCTGCAACCCCAGTAGACCCAGAACAGATGACCAAGAGGAAGAGAAGTAACAGTGCATTGAAAAACGAGTTTTTAGAATCTTTGAAACACAATACTGATCCAACTGCAGAAACCCCAGTTCATGAAACTAAAAGAACCAAAACTAAAAAATTTATGGGCAGATGCAATGCTGATCTAGCTGCTAAAGCCCCGGTTCAGAGAACTGAGTCTCTCAAAGTCACTAGATCTTCTTTTAAACGTCGTGGTGAAAGTTCCATGGGCAAATGCAATGCTCAACTAGCTGCTGAAACCCCGGTTGGGAGAGTCACTAGATCTGTTTCTAAACGTCATAGTGAAAGGGGGGAAGAAGGTTTGCTAAGTGCTTACTCTGTCATGAGCACGGACACTTCAGCTATAACTGCCCTCAAAGTGAGACACTACCGCTCTAATCCCTCAAAATGGTCACAGAAATTATCCAAAGCATCAATGGAAACTAAAGGACAGCCTCTTCCCGAACGTAGGATGGTCTTCCGGATGACCCCAAGTGCTCCCGCTCAGGGAACTCGGTTCTCGGTTCCTATGCCATAA 5604 0.4486 MVSQRQRLARKRFKAEHPELFPNPEPTPPKDPNKKKKKSSAFKRKRAESKPGSWKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKVEWEKNKICLRCRRRGHRAKNCPEVQEAAKDVKYCYNCGETGHSLTLCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGRQGSGAANGPVGRSTRIEERSRGKVTKFISGDDIEDDFMVDDIHSGNNNKSAKSEDEIAKPKKKDPKVSDAMTVTDSHDGTLSQISDSKQCREGENPQTLTSPEHGGTDKRKKKRKKRNDESNEQSQIEVCPKPLVDLLLFQEENGVAALDNPNPIYNKKKTKNLHGEQQLHPSNSSIGICVVSDDTQGEEARQGDANGNRGLCPNPLVDRPIPIAPREENGEATAQNHCSIPKKKKSLPVAEQICDSSILIGVEPGFTREKGSRQGDANGNGILCPKPVVTLNPIVSHEENAKATAQDHNSILKKTLPGAEQICDSSILIGVEPGFTKEKGSRQGDANGNGVLCPKPVVTLNPIVSHEENAKATAQDDNSILKKKTLLGAEQLCDPGDNGNEGFCPKTSVDTQLPIVPREESAEATAQNPTPNPKKKRKRKKKKKSLRGAEQMCDPSVQIGVELDVRREEREQQGSETSTQNPNATPKRKRRNNVENELQQLQTCDPSIPIYVEPEVKKGEGAHRGDANEAGISGINEERLVPDATAPENTHWKNDSSGKKEKVFKPDCSQPEVVLQLDTATPSDLELKQKAQPIEAKIEYPQTSLRAQHTQPQPSSNHAPAVRGINEECPAPDPAPLEHTHQKKRTRKKKSVLNLPRVELQLEPEPKPKESNNTEHPQQCTPYLELKVMVKIGAEANVDHSQVCPQPELAPPLDITTPNVTVVEKRVELTEANVENPQACSKPELASLIDLPAPTGPEKKQQAYPIKIPEKHTQLPKSQPCAEPLVDSTTPIDLGRREHTNKRVIEKIMCSEEKVGNHGSPLHMDITLNLAPDPGQQDPASSLSSQPVSLTDQAIPVDPAIPIDSEQKMKKKIKQRETVVVGEEEPNHNKCDTEQPKVTIQKSTFIEAPPIDPTIKMDHCLAVPMCPTNSTDIKQEISKKNRKKKRKGGMRAEKKKETEPSEAHVQHPQPSIHEPAVRGINEKCPAPDPAPLAGPHPKKKRRKRKSVLNLPRVELQLEPEPKESNNIEHPQECTSSSELKVTVKIGTETNADHSQVCPKPELAPPLDIANPNDTVVEKRAEPSKANVEGPQACSKLKLASLIDLPAPTGPEKEQETYPFKIPEEHTQLPKPQLCAEPPSDLTTPNDQSRRKQKNKRVIEKIMCSEEKEVNYGSPLHMDITLNVAPDLVQQDPTTPLSLQPASLIDQTIVVDPAIPTDAEQKMKRKIKQRETVVEGEEEPSHNKCDTEQPKVTIQNSTCLIEAPPIDPAIKMNHCLTFPMCPTNSKDIEPEISNTNRKKKRKSARKSEVAEANKQNSEAAEPNERNGKLNEVPSGASAQQFVYPITVPSNDQINSIGAATLIDTTTPIDQGQEMTKKKRKKKRNRRSHINEGAEPNEPDDKQPETAVQGFVYPIVAPSMDLTISAQPLPIDTVTPIDQDKKTCKEKSKRSALISEGAELNEHDGKPAETPVQQSIYPIAAPSIESAIPTGQAPQIDPATPVDPEQMTKRKRSNSALKNEFLESLKHNTDPTAETPVHETKRTKTKKFMGRCNADLAAKAPVQRTESLKVTRSSFKRRGESSMGKCNAQLAAETPVGRVTRSVSKRHSERGEEGLLSAYSVMSTDTSAITALKVRHYRSNPSKWSQKLSKASMETKGQPLPERRMVFRMTPSAPAQGTRFSVPMP 1867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00969 1867 MobiDBLite consensus disorder prediction 602 676 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 616 630 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1235 1275 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 789 862 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 703 752 - -
Spst10g00969 1867 ProSiteProfiles Zinc finger CCHC-type profile. 95 110 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 FunFam Zinc finger CCHC-type-containing 9 145 198 - -
Spst10g00969 1867 PANTHER OS04G0555800 PROTEIN 1 261 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 266 296 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1550 1587 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 231 321 - -
Spst10g00969 1867 SMART c2hcfinal6 147 163 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 SMART c2hcfinal6 69 85 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 SMART c2hcfinal6 174 190 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 SMART c2hcfinal6 94 110 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 SMART c2hcfinal6 120 136 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 Gene3D - 118 168 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 737 751 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 958 977 - -
Spst10g00969 1867 SUPERFAMILY Retrovirus zinc finger-like domains 63 111 IPR036875 GO:0003676|GO:0008270
Spst10g00969 1867 MobiDBLite consensus disorder prediction 190 216 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1 61 - -
Spst10g00969 1867 ProSiteProfiles Zinc finger CCHC-type profile. 148 163 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1116 1196 - -
Spst10g00969 1867 Gene3D - 63 117 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1570 1584 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1823 1846 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1465 1515 - -
Spst10g00969 1867 ProSiteProfiles Zinc finger CCHC-type profile. 121 135 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 MobiDBLite consensus disorder prediction 789 804 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 381 400 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 231 264 - -
Spst10g00969 1867 MobiDBLite consensus disorder prediction 1309 1340 - -
Spst10g00969 1867 Pfam Zinc knuckle 148 163 IPR001878 GO:0003676|GO:0008270
Spst10g00969 1867 SUPERFAMILY Retrovirus zinc finger-like domains 116 165 IPR036875 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00969 94 191 C2H2 Transcription Factor Family AT5G20220 28.696 5.88e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00969 - - gmx:102664068 619.002