Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00961 ATGGAGTTTGTAGGGCTATGTGTAGTTCTTGTTGCCTTCTTGGTGGCACTTTGCCTCCTCTTGTTCTTGATACTAATATTTTCTTGGTGGGTTTTCCCTAACCAAAAACTTAAAATGCTTAAGAAATATGGGTTGGGAGGACCAACCCCAAGTTTTCCTCTTGGAAACATTGAAGAGATGAAAAGAAAGAGTAGCATTCAATCTTCGGTTGTTTCCTCAAATCTCGCACACGATATACACTCTTATGTTTTCCCTTACTTTTCTAGCTGGCAGAAATCACATGGTAAGGTGTTCGTGTACTGGTTGGGCACGGAGCCATTTTTGTACATTGCAGAGCCTGAGTTTTTGAAGAAAATGTCGACAGTGGTGATGGCCAAGAAATGGGGAAAACCAAGTGTTTTTAGAAATGACCGAGACCCTATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGCAATGATTGGGTTCGTCACAGGCACATTGTTGCTCCCGCATTCAATCCCATTAACTTGAAGGCAATGGCAAACATGATGGTTGAATCCACGAATCAAATGATAGACAGATGGGTTACCCAAATAACCTCCTTCAACCCTGAAATCGACGTGGAGAGAGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGACGACAATGCAAGAGATGTTTTCGACAAATTACGAGCCTTGCAAATGACACTCTTTAAGACCAATCGCTATGTAGGGGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACGTTAGAGGCCAAGAAACTTGGAAAAGAAATCGATGAGCTCTTGTTGTCCATCATAGAAGCTCGGAAGAATTCACCCACAAAGAAATGTCAACAAGATTTATTAGGTTTGTTGCTTCAAAATAATGAGGTTGATGGGCGGTTAGGAAAGACATTAACATCGCAAGAAGTAGTTGACGAATGCAAGACCTTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCTATCACATGGACCTTGTTGCTTCTAGCCATTCACCAAGATTGGCAAAATCAGTTGAGAGATGAGATACGAGACGTGGTGGGTGGTGAAAAACTTGACATCACCTTGCTCTCTGGTTTAAAGAAGATGAAGTGCGTAATGAATGAAGTTCTAAGACTATACCCACCGGCACCAAATGTGCAAAGGCAAGCAAGAGAGGACATTAAAGTTGATGACATAACAGTGCCTAATGGAACCAACATGTGGATAGATGTGGTAGCCATGCACCACGACCCTGAATTATGGGGACAGGATGCGAATGAGTTCAGGCCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAGCACAAGATGGGGTATTTGCCTTTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAATTTGACCTTTATGGAGTACAAGATTGTGTTAACCCTCCTTCTCTCTAGATTCACTTTTAAGGTTTCCCCTGGTTACAAACATTCACCATCTATCATGCTGTCTCTAAGGCCAAGTCATGGACTTCCACTCGTAGTTCAGCCCCTTTAG 1548 0.4289 MEFVGLCVVLVAFLVALCLLLFLILIFSWWVFPNQKLKMLKKYGLGGPTPSFPLGNIEEMKRKSSIQSSVVSSNLAHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYIAEPEFLKKMSTVVMAKKWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIDRWVTQITSFNPEIDVEREIIATAGEIIARTSFGMKDDNARDVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIEARKNSPTKKCQQDLLGLLLQNNEVDGRLGKTLTSQEVVDECKTFFFGGHETTALAITWTLLLLAIHQDWQNQLRDEIRDVVGGEKLDITLLSGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGQDANEFRPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPGYKHSPSIMLSLRPSHGLPLVVQPL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00961 515 Coils Coil 262 282 - -
Spst10g00961 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 Pfam Cytochrome P450 84 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Spst10g00961 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 507 - -
Spst10g00961 515 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00961 515 SUPERFAMILY Cytochrome P450 80 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00961 Spst-Chr10 10343701 10345827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00961 13 515 Cytochrome P450 AT5G52400 60.118 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00961 - - gmx:100803409 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00961 10 10343701 10345827 Spst4g03198 4 71634862 71638432 PCT