Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00957 ATGAATCTCCTCGTGCCGCTCGCATTCCTGTGTCTCGCCACCGTAGCGCCGTGGCGTGTTTGCTCGCAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTCCCAATGCTCGTGCTAGCGGCGCTCTGTGTTTGGACGGAAGTTTACCGGCGTATCACTTGCACAGAGGATTCGGTGCTGGTGTGGACAACTGGCTTCTACAATTTGAGGGTGGTGGATGGTGCAATGACTTGACATCATGCTTCGAGAGAGCCAAAACGCGGAGGGGTTCAACAAATTTTATGAACAAATTGGAAGTCTTCTCTGGTATTTTAACCAACAATGCCACCCTTAATCCAGATTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACTGGAGATGCTGTGTTCACTAACAAGACAACGACACTTCACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCACGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCCGGTTGCTCAGCAGGAGGTTTAGCGACCTTTCACCATTGTGATGACTTCGCCAAGTATTTGCCAACGAACGCTACTGTTAAATGCTTGAGTGATGCTGGTTTTTTTCTTGACGAAAGAGACATCAGTATGAACCACACCATGAGGTTTTTCGTCAAAAGTCTAGTTCAGTTACAGGGGATAGAGCAGAACCTGAATAGAAATTGTACCAAATCACTGTACTTTCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAGCTACATATCAACGCCATATTTTATTTTGAACTCTGCCTATGATGTCTACCAATTCCATAATATATTGGTGCCATCCTCTGCCGATAAGCAAGGACTCTGGAACCACTGCAAGATGAACCCGGCTGCGTGCACATCAGACCAAATCAATACATTGCAAGGTTTTAGGCTCGACATGCTTGGAGCTTTGAGACCGTTCTATTTGAGTTCAAGAAGAGGAGGGATGTTCATAAATTCTTGTTTTGCTCATTGTCAGAGTGAACTAACTGAAACATGGTTTGGAGATGATTCTCCAAGAATAAAAAACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACATATGCAAGGAAATCGATTGCGCGTATCCATGTGATGCAACTTGCCATAATCTTATACCCTTGAGATCAGGTCAGTTGGATGATTAA 1212 0.4422 MNLLVPLAFLCLATVAPWRVCSQQQRLLVNMTLVPNARASGALCLDGSLPAYHLHRGFGAGVDNWLLQFEGGGWCNDLTSCFERAKTRRGSTNFMNKLEVFSGILTNNATLNPDFYNWNRVKLRYCDGASFTGDAVFTNKTTTLHFKGQKIWEAIIHDLLPQGLGKARKALLSGCSAGGLATFHHCDDFAKYLPTNATVKCLSDAGFFLDERDISMNHTMRFFVKSLVQLQGIEQNLNRNCTKSLYFPDLCFFPQYALSYISTPYFILNSAYDVYQFHNILVPSSADKQGLWNHCKMNPAACTSDQINTLQGFRLDMLGALRPFYLSSRRGGMFINSCFAHCQSELTETWFGDDSPRIKNKTIAEAVGDWYFSRNICKEIDCAYPCDATCHNLIPLRSGQLDD 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00957 403 PANTHER NOTUM-RELATED 13 392 IPR004963 GO:0016787
Spst10g00957 403 Pfam Pectinacetylesterase 22 375 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00957 Spst-Chr10 10287430 10299676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00957 1 395 Carbohydrate Esterase AT5G23870 64.232 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00957 K19882 - gmx:100802358 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00957 10 10287430 10299676 Spst10g00957 10 10287430 10299676 ECH