Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00942 ATGAGGTTGGCTTTTCATATTTCAAGAATTTTGCTCGAGGAGAAGTTACTGTTGTATTTCACAACAATGACAATGGCTTCTGTTCCAAAAGTGGTGCTCGGTTTAGTTGCATTTGCAATCTTCTGGGTGTTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCTATTGGGAGAACTGCAGGGTCCCTCTTTGGAGCCATGCTTATGGTCCTATTCCAAGTTATTACTCCAGATGAAGCTTATGCCACAATTGATCTTCCAATTCTCGGTCTTCTTTTTGGGACAATGGTTGTCAGTGTCTATCTTGAAAGAGCAGACATGTTTAAGTATATAGGGAAGTTGCTGTCTTGGAAGAGTAGAGGTGCAAAGGACTTACTTTGTAGGATATGTGTTGTTTCTGCTGTCTCAAGCGCTCTCTTCACAAATGACACGTCTTGTGTTGTTTTAACTGAATTCATATTAAAAATTGCTAGGCAGCATAACCTTCCACCAACACCCTTCCTACTTGCCCTTGCTTCAAGTGCTAACATTGGGTCCTCAGCAACTCCAATTGGCAACCCCCAAAACCTGGTTATAGCTGTTCAGAGTAAAATATCATTTGGGAATTTTCTGATTGGTATTCTTCCAGCTATGGTGGCAGGAGTTGTAGCAAATGCTATAATTCTTCTAATCATGTATTGGAAGTTATTATCTGTTCACAAGGACGAAGAAGATGCAGGGGAAGAATCTGTGGTAGAGGACGAGTATGATTCCCATCGGTTTTCTCCAGCCACTATGTCTCATTTTTCATCCTTGAATTCTCAAGAATGGAATTCCCATCTTGAAGCTATTAGTATTCAGAACTCTCCTCAACAGATTCTACGAAGCCGATCGATTGCAAATGCAAGTGAAAGTAATGGTATTTCTAGCAATGCTTTTGATTCTGCTAGAATCTCAAGTTTACCGAGGGACGGAATAAATGGTGTGCCATCTCTGATAAAGGATGAAACTAGTCCAGCAAGTTCTTCAGCAACCGTAGATACACTTATTCACCCTTCTGAAAGAAAAAACAATTTTATCTTAAGATGGAAGAGGGTATTGTGGAAATCTTGTGTTTACATCATCACAGTTGGAATGCTGGTTGCTTTACTTTTAGGTTTAAATATGTCATGGACTGCCATTACTGCGGCACTTGCTCTGATAGTTCTTGATTTCAAAGATGCTAGACCATGTTTAGAGAAGGTTTCATATTCGCTTTTGATATTCTTTTGTGGAATGTTTATCACGGTAGATGGCCTCAATAAAACTGGGATTCCAAGTGCTTTGTGGGATGTAATGGAGCCCTATTCTCGTGTTGATCGTGCTAGTGGAGTTGCAGTTCTTGCAATTGTCATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACAGTTCTCTTGCTTGGAGGACGTGTAGCAGCCTCAGCTGCTGCAATTTCCAAAGCAGACGAGAAGAAGGCATGGCTGATATTAGCTTGGGCCAGCACCATATCAGGGAATCTCTCACTATTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAGGCTATCCGTGCTCCAAACCTACCACACACGTTAACCTTCTGGAGTCACCTGAAATTTGGCATTCCTTCCACAATCATAGTCACAGCTATAGGCTTGACATTCATAAGATGA 1671 0.4123 MRLAFHISRILLEEKLLLYFTTMTMASVPKVVLGLVAFAIFWVLAVFPAVPFLPIGRTAGSLFGAMLMVLFQVITPDEAYATIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSRGAKDLLCRICVVSAVSSALFTNDTSCVVLTEFILKIARQHNLPPTPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGNFLIGILPAMVAGVVANAIILLIMYWKLLSVHKDEEDAGEESVVEDEYDSHRFSPATMSHFSSLNSQEWNSHLEAISIQNSPQQILRSRSIANASESNGISSNAFDSARISSLPRDGINGVPSLIKDETSPASSSATVDTLIHPSERKNNFILRWKRVLWKSCVYIITVGMLVALLLGLNMSWTAITAALALIVLDFKDARPCLEKVSYSLLIFFCGMFITVDGLNKTGIPSALWDVMEPYSRVDRASGVAVLAIVILVLSNLASNVPTVLLLGGRVAASAAAISKADEKKAWLILAWASTISGNLSLLGSAANLIVCEQAIRAPNLPHTLTFWSHLKFGIPSTIIVTAIGLTFIR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00942 556 PANTHER TRANSPORTER ARSB-RELATED 23 554 - -
Spst10g00942 556 CDD YbiR_permease 50 555 - -
Spst10g00942 556 Pfam Citrate transporter 49 502 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00942 Spst-Chr10 10170457 10174653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00942 - - gmx:100781849 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03220 4 71894477 71896418 Spst10g00942 10 10170457 10174653 ECH
Spst10g00942 10 10170457 10174653 Spst10g00942 10 10170457 10174653 ECH
Spst4g03219 4 71887797 71889662 Spst10g00942 10 10170457 10174653 PCT
Spst10g00942 10 10170457 10174653 Spst4g03220 4 71894477 71896418 PCT