Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00935 ATGTGCAATCCGAAATGCGAAAGAGGCATTCACATTATTTGTACCGTTCAGAAAAGATCCAAGAAAATAAAAGGAATAGAAGAAGGAAAACCTTTACTCGTTTTCTTAATCGAATTTAAAATACTCTCCGTTATATTCACCAGAATCACTCCCACATTTCAACCCCCACTGCAAAAGAAACCCAACCCCTCTCTCTCATCTTGCTTTGTCCCATGTGTTTCTCCAAAATCCAAACTTTTTAGTCGCTTCCTTCTTTTCTTCGCCAAAACCTGTGGGATGTCGTCGCCGGGGTTCCCAGGTGGTCGACCCTCCGAATTCTACGGCGGAGCAACCGGATTCCCGACTCAATCCATGGCAGTTCAAACCACTATGAACAGCCACCCCGCCGCCGCCCACCACCCTCTCTACCGATCCCAACCTTCAATTTTGCTTCACCCCTCATCCCACATCGCCCAACACCAAACATCCACTCTCATCGGGAAACGTACCCTCGCCGAATTCCAAACCCACAACCTCAGCAACAACCCCAACAACCTTATTAGCAATAATAATAACCAACTCCTTCCGAACTATCAACTTCGTTCGGTAAAACCCAGAACTTTTCAACCCACCAATTTCTCCACAGCCTCTTCTGAATTATCCGCCTTTCCCTCATACCGTTACGGCGCGTCCTTTCTCCACCAACTTCGCCCTAACGCTGTTAACGCACAACCCGTCGCGAGTTCGATCCTCTCTAACACAAATTTCCCTCCGGTTCAAAGCAGGCTAAGCGCGACCCGGGAACCGGTGAAGAATTCAATAGACCACCGCCTCCAGGAGTTGGAAAAGCAGCTTCTTGAAGACAATGATGACGACCAAGGCGACGCCGTTTCGGTCGTTACCACCTCTGAATGGTCACACACAATACAGAACTTAATCACTCCACAGAAACGTGCATCGTCATCGCCAACTTCCTCTACGACGTCGTCCAACTCCTCCGCAGAATCCATCAGTGCCAAACAGTCCCTAACCGAGGCCGCCGAAGCGATTTCAGAAGGGAGATTCGACGCCGCGACGCAGATCCTAACCCGATTATCGCAGAATCCGGATCAACGCTTCGTAAATTGCATGGTTTCCGCCCTCAAATCGCGGATGAGTCACGTTGAGTATGCACCACCGGTTGCGGAGTTGTTCAGCAGGGAACACGCCGAGTCGACTCAGTTGCTATTCGAACACTCTCTCTTCTTTAGGGTCGCTCTCATGGTCGCCAACATCGCAATCATCGAATCCGCATTTGACGATAAATCAGAGAACGCGAAACTGTGCGTGGTAGATTTCGATATCGGCAACGGGAAACAATACGCGAGTCTTCTCCACGAGCTCTCCGCGCGTCGCAAGGGCACTCCGGCCGCCGTCAAGATCATCGCCGTGGCCGAGAACGGCGCTGACGAGAGGCTGAGCCCCGCGGGTGTGATGCTGGGAAGACTCGCGGAGCAACTCGGGATAGGTTTCGAATTCAAAGTGCTGAGTCGGAGACTCGCCGAGTTGACTCGCGAGTCGTTGGGTTGCAACGCCGACGAGACGCTGGCGGTGAACTTTGCGTTCAAGCTTTACAGAATGCCCGACGAGAGCGTCTCCACGGAGAACCCGCGCGACGAACTTCTGCGGCGCGTGAAGGCTCTCTCGCCGCGCGTGGTGACTCTGGTGGAGCAGGAAGCTAACACCAATACGGCGCCGTTCGTGGCTCGCGTGGCCGAGTCATGCGCGTATTACGGTGCGCTCTTTGACTCGCTCGAGTCTACTATGTCACGGGAGAATTCGAGGCGAGTTAAGATCGAGGAGGGACTGAGTCGGAAGGTGGCTAACACGGTGGCATGCGAAGGAAGAGACCGTGTGGAAAGGTGCGAGGTGTTTGGGAAGTGGCGGGCGCGCATGGGCATGGCTGGGTTCATGTTGAAACCACTGAGTCAGAGAGTCGCTGAGTCAATAAAGGCAAGACTCGGTGCCGAGAACCGAGTCGCTGTAAAGGTAGAGAATGGTGGGATTTGCTTTGGCTGGATGGGAAGAACTCTCACCGTGGCTTCTGCTTGGTGTTAA 2076 0.5299 MCNPKCERGIHIICTVQKRSKKIKGIEEGKPLLVFLIEFKILSVIFTRITPTFQPPLQKKPNPSLSSCFVPCVSPKSKLFSRFLLFFAKTCGMSSPGFPGGRPSEFYGGATGFPTQSMAVQTTMNSHPAAAHHPLYRSQPSILLHPSSHIAQHQTSTLIGKRTLAEFQTHNLSNNPNNLISNNNNQLLPNYQLRSVKPRTFQPTNFSTASSELSAFPSYRYGASFLHQLRPNAVNAQPVASSILSNTNFPPVQSRLSATREPVKNSIDHRLQELEKQLLEDNDDDQGDAVSVVTTSEWSHTIQNLITPQKRASSSPTSSTTSSNSSAESISAKQSLTEAAEAISEGRFDAATQILTRLSQNPDQRFVNCMVSALKSRMSHVEYAPPVAELFSREHAESTQLLFEHSLFFRVALMVANIAIIESAFDDKSENAKLCVVDFDIGNGKQYASLLHELSARRKGTPAAVKIIAVAENGADERLSPAGVMLGRLAEQLGIGFEFKVLSRRLAELTRESLGCNADETLAVNFAFKLYRMPDESVSTENPRDELLRRVKALSPRVVTLVEQEANTNTAPFVARVAESCAYYGALFDSLESTMSRENSRRVKIEEGLSRKVANTVACEGRDRVERCEVFGKWRARMGMAGFMLKPLSQRVAESIKARLGAENRVAVKVENGGICFGWMGRTLTVASAWC 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00935 691 Coils Coil 264 284 - -
Spst10g00935 691 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 307 681 IPR005202 -
Spst10g00935 691 MobiDBLite consensus disorder prediction 303 333 - -
Spst10g00935 691 Pfam GRAS domain family 333 690 IPR005202 -
Spst10g00935 691 ProSiteProfiles GRAS family profile. 323 691 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00935 Spst-Chr10 10093915 10095990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00935 160 690 GRAS Transcription Factor Family AT5G52510 47.341 2.59e-143 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst10g00935 GRAS 9.3e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00935 - - vra:106769615 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00935 10 10093915 10095990 Spst10g00935 10 10093915 10095990 ECH
Spst4g03236 4 72076211 72078148 Spst10g00935 10 10093915 10095990 PCT