LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst10g00931	ATGAGTTTTCTCAGCCTGACTCACGGTCTTCAAGGAATCCAAAGGCCAAAACCAAACCTCTCTTCAATGAACACCCTAAACAACATACCCTTTATCCTCCTCCTTTTCATACCGTTCTCAGTTTCATTCTCTCCCACAGAAAACTTTCTTCTCAGTTGTGGAGCACACAACAATGCCTCCCTCTTTAACAGAGTCTTCATGGGCGATTCCACCAACCCAGGTTCCAATTTTCTCTCTTCAGATGATTCAGTTTCACTCGCATATCAAAAGCCACCTCAGAATTTGCCCACTCTGTACCACACAGCAAGAGTTTTCAGCAACACTGGGAGTTACAGGTTCAACATGAAGAAAAACGGCACCAACTTGGTGCGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTTTTGATCTAAAATCAGCAAATTTTAGTGTCTATGTTAATGGGGTTTCGGTACTGAGCAATTTCCAGCCACCTAATGATGTGCTTCTCAAAGAGTTCATTCTAAACATAGAGTCAAACTTTCTTGAGATTTTGTTTAGACCTGTTGGTGACTCAGGTTTTGCCTTTGTCAATGCTTTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATTCTGGAGCCAGGTTGGTCGGTCCCTCTGGGGTGGAAGAGTACAGAAACCTTTCATCCCAGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAAATAACTCCGTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGATTTCAAGGGTGCAGCAAAGCCTGCAGTGAGCACTCACATACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATAGCACCTGAAAATGTTTACATGACTGCTCAACAAATGAATAGGGAAAACTCAAGTTTGGCATCAAGGTTCAACATAACCTGGAACTTCCCTGTCTCTCCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATCGTTAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGGGTACATTGCATACAAGGATCTTGATTTGTCCGCCCTTACCACCCACATGCTTGCATCTCCTGTCTACGTGGATTTTGTTACAAATTCAGATTACTCGGGTTTTGTTCAAGTGAGTGTTGGTCCTTCTGAGCTCAGCACTTCAATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGGAGATGGTCAATAATGTCAGTACTAATGTTGTGCATAGGAGGAAGAATTTGTGGGTGTTGGTGGGTTCAGTTGTTGGAGGAATTGTTGTTTTGTTTCTAGTTGTAACTGCTTTTGTACTTGGTACCAAATGCAGGAACAAGAAACCAAAACAAAGGACATTGGAAAGTGTTGGATGGACACCTTTAAGCATGTTTGGAGGGAGTTCCCTCAGTAGAAGCTCTGAGCCTGGTTCTCATGGACTTCTTGGCCTGAAGATCCCTTTTACTGAAATACAATCAGCAACAAACAACTTTGATAGAAATTTGATTATAGGTTCTGGTGGGTTTGGTATGGTCTACAAGGGAGTGTTCAGAGACAATATGAAGGTTGCTGTAAAGAGAGGCATGCCAGGGTCCAGACAAGGCCTTCCTGAGTTTCAGACTGAGATAACAGTTTTGTCCAAAATTCGACATCGCCACCTTGTTTCACTAGTTGGTTTCTGTGAAGAAAACTCAGAAATGATACTTGTCTATGAGTATGTTGAAAAGGGTCCTCTGAAGAAGCATTTATATGGCTCATCACGACAGCCACCTCTCTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCGGCCAGAGGTCTTCACTATCTTCACACTGGCTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACCAACATATTACTTGATGAAGACTATGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGGTCAGGGCCATGCATCAATGAAACACATGTCAGTACTAATGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAGCAGCTTACAGATAAGTCAGACGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAATTAGCAAGAGAACAGGTGAATTTGGCAGAATGGGCACTTGAATGGCTGAAGAAAGGCATGCTGGAGAAAATTGTTGACCCCCATCTTCTTGGACAGATCCAACAAGACTCCTTAAAAAAATTTTGTGAAACCGCAGAGAAATGTTTGGCTGAGTATGGTGTTGACAGGCCAGCTATGGGTGATGTCTTATGGAATTTGGAGTATGCACTTCAGCTCCAAGAAAGTGTACATCAAAGGGAGCCACATTCCAACAGCAGTGCTAGTGGAGCTGTGAGTGTGACAAATACAGTTATTCCTGGAAATCCTTCTACCAACACAAGAGCAGCTAGGGATTATGATAATTTTTCTTCAGATGTAAGTACTAGCCAAGTGTTTTCCCAGCTAATGAACAATGAAGGCAGATAG	2535	0.4284	MSFLSLTHGLQGIQRPKPNLSSMNTLNNIPFILLLFIPFSVSFSPTENFLLSCGAHNNASLFNRVFMGDSTNPGSNFLSSDDSVSLAYQKPPQNLPTLYHTARVFSNTGSYRFNMKKNGTNLVRFHFSPFKAQSFDLKSANFSVYVNGVSVLSNFQPPNDVLLKEFILNIESNFLEILFRPVGDSGFAFVNALEVFTAPVDFVIDSGARLVGPSGVEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLDFKGAAKPAVSTHIPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVSPGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALTTHMLASPVYVDFVTNSDYSGFVQVSVGPSELSTSIRMNAILNGAEIMEMVNNVSTNVVHRRKNLWVLVGSVVGGIVVLFLVVTAFVLGTKCRNKKPKQRTLESVGWTPLSMFGGSSLSRSSEPGSHGLLGLKIPFTEIQSATNNFDRNLIIGSGGFGMVYKGVFRDNMKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLKKGMLEKIVDPHLLGQIQQDSLKKFCETAEKCLAEYGVDRPAMGDVLWNLEYALQLQESVHQREPHSNSSASGAVSVTNTVIPGNPSTNTRAARDYDNFSSDVSTSQVFSQLMNNEGR	844

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst10g00931	844	Pfam	Protein tyrosine and serine/threonine kinase	510	706	IPR001245	GO:0004672\|GO:0006468
	Spst10g00931	844	CDD	STKc_IRAK	511	777	-	-
	Spst10g00931	844	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	626	638	IPR008271	GO:0004672\|GO:0006468
	Spst10g00931	844	SMART	serkin_6	505	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst10g00931	844	PANTHER	OS07G0166700 PROTEIN	492	783	IPR045272	GO:0004714\|GO:0006468
	Spst10g00931	844	FunFam	Receptor-like protein kinase FERONIA	581	796	-	-
	Spst10g00931	844	FunFam	Receptor-like protein kinase FERONIA	226	411	-	-
	Spst10g00931	844	SUPERFAMILY	Protein kinase-like (PK-like)	492	778	IPR011009	-
	Spst10g00931	844	Gene3D	-	226	411	-	-
	Spst10g00931	844	Gene3D	-	48	201	-	-
	Spst10g00931	844	Gene3D	Transferase(Phosphotransferase) domain 1	581	802	-	-
	Spst10g00931	844	MobiDBLite	consensus disorder prediction	787	820	-	-
	Spst10g00931	844	ProSiteProfiles	Protein kinase domain profile.	505	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst10g00931	844	ProSitePatterns	Protein kinases ATP-binding region signature.	511	533	IPR017441	GO:0005524
	Spst10g00931	844	Pfam	Malectin-like domain	51	408	IPR024788	-
	Spst10g00931	844	FunFam	receptor-like protein kinase FERONIA	474	580	-	-
	Spst10g00931	844	FunFam	Putative receptor-like protein kinase	48	199	-	-
	Spst10g00931	844	Gene3D	Phosphorylase Kinase; domain 1	478	580	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst10g00931	Spst-Chr10	10059696	10062230	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst10g00931	43	844	Receptor kinase-like Gene Family	AT3G46290	48.372	0.0	729

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Spst10g00931		Malectin_like	1.2e-32	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst10g00931	-		-	gmx:100801169	1475.69