Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00929 ATGGCGGCAGGACTCTCCACCGCCGCAAACTTAAAGCCCTACAATCTCCTACAACCCCCAATCCCTCTTCCTAAACCAAAACAATCACTTTTCTTCAACCCCTTACCATCTTTCCATCAAAGCACAATCCTTCGGGTTCGACCCCCGAGAAGAATGAGTGGCTTCTCCGTTTCTGTCCTCACAGAGGATCCCAAACGGAACGTCCAGATCGAAACCTACGAAGAAGAAGAGGAAGAACAACAACAAGAAGTGAATCCTCAATTTGTGTCGGCACGAATGGAAGAGAAATTGGCCAGAAAGAGGTCTCAGAGGTTCACTTACCTCGTTGCGGCTGTTATGTCTAGCTTTGGTGTCACCTCTATGGCAGTCTTCGCCGTTTATTATAGATTCTCTTGGCAAATGGAGGGTGGAGATTTTCCTTGGTCTGAAATGTTAGGCACATTTTCCCTCTCCGTGGGTGCTGCCGTGGCTATGGAATTTTGGGCAAGATGGGCTCATAGAGCACTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCGCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGATGTTTTTGCGATAATTAACGCTGTCCCTGCCATCGCTCTTCTCTCATACGGTTTTCTCCACAAGGGTCTGATCCCTGGCCTCTGTTTCGGTGCAGGCCTTGGAATCACAGTGTTTGGGATGGCCTACATGTTTGTCCACGATGGATTGGTTCACAAGAGATTCCATGTGGGCCCCATTGCCAACGTGCCCTATTTCAGAAGGGTTGCTGCTGCTCACCAACTCCACCATACTGACAAATTCAACGGTGTGCCATATGGGCTGTTTTTGGGACCAAAGGAGCTTGAAGAAGTGGGAGGGCTAGAGGAGCTAGAGAAAGAGATAAGTAGGAGAATAAGGTCTGGTTCATGA 927 0.4908 MAAGLSTAANLKPYNLLQPPIPLPKPKQSLFFNPLPSFHQSTILRVRPPRRMSGFSVSVLTEDPKRNVQIETYEEEEEEQQQEVNPQFVSARMEEKLARKRSQRFTYLVAAVMSSFGVTSMAVFAVYYRFSWQMEGGDFPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFLHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFHVGPIANVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPKELEEVGGLEELEKEISRRIRSGS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00929 308 Pfam Fatty acid hydroxylase 154 281 IPR006694 GO:0005506|GO:0008610|GO:0016491
Spst10g00929 308 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 306 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00929 Spst-Chr10 10048286 10050000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00929 1 224 Chloroplast and Mitochondria Gene Families AT4G25700 57.265 4.81e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00929 K15746 - gmx:100802778 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03245 4 72178465 72180972 Spst10g00929 10 10048286 10050000 ECH
Spst10g00929 10 10048286 10050000 Spst10g00929 10 10048286 10050000 ECH
Spst4g03245 4 72178465 72180972 Spst10g00929 10 10048286 10050000 PCT