Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00920 ATGGATGAGGACTGGGATCTCTTTGCCGTCGTCCGAAGCTGCCAATCAACCACCAATACTTCTACCACAGCAATTCCACAAACCACCACCAATAATTCTCTGTCTTCCCTCCTCACTTCTACTGTCAAGGACCAAAAATATGATGCATTTTCCTTCCCCAATAATACAGTGCAACCCATAACCGATGAGTTTCATGAACTACACCAATTGTTTACACCCTTTAACCCCACCACCCCCACTATCCCTAGTGCTCCTGGCATCAATCCTAATTCCCCTTATTTCGCAGAACAGGAAAGTCAGCAAATTAGTGACCACCTTCCCATTTGGCCTCATTTTCTACCAGAACCTTCCACTCCCAGTTTCAACAGATTCCCTAACCATCAACAACAGCAACAGAATCAACTACAGGTCCTTCAGAAACAGGAATTTCATGCACCCCAGAACAGTTCTCCCACAGTTTCACCAAACACACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGTCAGGTAACAGCAGATAACCTCTCAGCGGATTTGTGGGCATGGCGAAAATACGGACAAAAACCGATTAAGGGTTCTCCATATCCAAGTTACACATACATATTCGTAGGAATTACTATAGGTGTAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGATATGTTCATTGTTACCTACACCGGAGACCACTCGCATCCCCGGCCAATCCACCGGAACTCGCTTGCCGGAAGTACCCGGAGTAAGACTCCGACGACGAATCCGCCACTGTTACCCGGGTCACTTTCCTTTCAAGATGCATCCTTTTCTTCTTCACCGCCACACTCTCCCACGTCGCCATCAGAAAATCCACCGGAAACCTGTGATGTCGAACCCGACCCGGATATGGAAACTGACGTGGACGATGACGGTGACATTCGATGACCCCATCACCGCCTTCTTGTGCAGCAAGTTTTGCATTGAAGTGACGTTGTCTCAGACTTGA 1032 0.469 MDEDWDLFAVVRSCQSTTNTSTTAIPQTTTNNSLSSLLTSTVKDQKYDAFSFPNNTVQPITDEFHELHQLFTPFNPTTPTIPSAPGINPNSPYFAEQESQQISDHLPIWPHFLPEPSTPSFNRFPNHQQQQQNQLQVLQKQEFHAPQNSSPTVSPNTQPQTPKSRKRKSQQKKMVCQVTADNLSADLWAWRKYGQKPIKGSPYPSYTYIFVGITIGVAAPKVVWLENKLNGVTLKPICSLLPTPETTRIPGQSTGTRLPEVPGVRLRRRIRHCYPGHFPFKMHPFLLHRHTLPRRHQKIHRKPVMSNPTRIWKLTWTMTVTFDDPITAFLCSKFCIEVTLSQT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00920 343 ProSiteProfiles WRKY domain profile. 179 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst10g00920 343 Gene3D WRKY domain 167 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst10g00920 343 Pfam WRKY DNA -binding domain 186 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst10g00920 343 MobiDBLite consensus disorder prediction 119 164 - -
Spst10g00920 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 204 IPR044810 GO:0003700
Spst10g00920 343 SUPERFAMILY WRKY DNA-binding domain 181 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst10g00920 343 MobiDBLite consensus disorder prediction 108 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00920 Spst-Chr10 9976422 9977669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00920 1 208 WRKY Transcription Factor Family AT4G01250 31.250 1.03e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst10g00920 WRKY 2.5e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00920 - - gmx:100792164 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01880 4 59381163 59382644 Spst10g00920 10 9976422 9977669 ECH
Spst1g01120 1 13605337 13606934 Spst10g00920 10 9976422 9977669 ECH
Spst4g02318 4 63906552 63915374 Spst10g00920 10 9976422 9977669 ECH
Spst10g00920 10 9976422 9977669 Spst10g00920 10 9976422 9977669 ECH
Spst4g01880 4 59381163 59382644 Spst10g00920 10 9976422 9977669 PCT