Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00913 ATGGCGTTAGAGGACACGGATTCCTTCGTCGAAAAGATGGATGACAAGTTCCATGATCATAACTCCGATTCCGAATCCTACTCCGATTCCGACGACGATCATGTCAAGAGGCCGCCGATCAAGACCTCCGGATCCAACGTTTACCGCCTCTTCGGCCGTGATCAGCCCGTCCACATGGTCCTCGGCGGTGGTAAACCTGCTGATATTTTGCTTTGGAGGAACAGGAGAAGCACAGGAATTGTAGTTGGAGCTGGAACTGTCTTTTGGGTTTTCTTTGAGATGATGGAATACCACCTGATAACTTTTATTTGCCATTTGTTGATTTTGTCCCTCGCTGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACAGCACATCCCACAAATAGTAATTCCAGAGCATTGCGTTCTTGAGGCTGCTTCTGCTATAAGAATTGAACTAAACCGAGGCCTCGTTGTTTTGCGGGAAATTGGAACTGGGAGAGATTTAAAGAAGTTTCTGAGCGTTATTGCTGTATTATGGGTTATCTCGGTCATTGGGGGCTGGTTCAACTTCTTGACCTTGTTTTATCTATTCTATTTGTCACTGTTCACATTGCCACTGCTGTATGAGAAATATGAAGACCAGGTTGATGCAATTGGTGAGAAGGCAATGATTGAGATAAAAAAGCAGTATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCAGGATTCAAAAAGGATTAG 750 0.444 MALEDTDSFVEKMDDKFHDHNSDSESYSDSDDDHVKRPPIKTSGSNVYRLFGRDQPVHMVLGGGKPADILLWRNRRSTGIVVGAGTVFWVFFEMMEYHLITFICHLLILSLAALFLWSNASVFIHKSPQHIPQIVIPEHCVLEAASAIRIELNRGLVVLREIGTGRDLKKFLSVIAVLWVISVIGGWFNFLTLFYLFYLSLFTLPLLYEKYEDQVDAIGEKAMIEIKKQYAVFDAKVLSQIPIAGFKKD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00913 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
Spst10g00913 249 PANTHER RETICULON 42 242 - -
Spst10g00913 249 MobiDBLite consensus disorder prediction 15 39 - -
Spst10g00913 249 MobiDBLite consensus disorder prediction 15 41 - -
Spst10g00913 249 Pfam Reticulon 67 221 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00913 Spst-Chr10 9930321 9932529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00913 - K20721 gmx:100790190 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01894 4 59521248 59523131 Spst10g00913 10 9930321 9932529 ECH
Spst3g01054 3 13882246 13883941 Spst10g00913 10 9930321 9932529 ECH
Spst10g00913 10 9930321 9932529 Spst10g00913 10 9930321 9932529 ECH