Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00905 ATGGCAAATGCTGCTTCTTCTTCATCTTCCTTTTTCTGTTATTGCTTCATTCTTGCTCTGGGCCTGTCTTCTTTTGGTACTTGCATTTCGGCCCAGATTGGGTTGGGCTCCAGCTTGTTGTCTAGCAAGGCCCAAACATGGGTTTCGGAAAATGGCACCTTTGCTTTGGGGTTCACTCCGGCAGAGAGTGATCATCGATTGTTTGTGATCGGCGTTTGGTTTGCACAGCTTCCAGGAGATCGAACTTTGGTTTGGTCACCCAATAGAGACACTCCTGTATCCCAAGATGCAACATTAGAGCTTGACACCACTGGCAACCTTGTTCTCATGGATGGAGACAGCACAATCTGGACCTCTAATACCTCACGAGCTGGTGTACAAGCAGCAGTCATGGAAGAATCTGGCAACTTCATCCTCCACAATTCCACCAACCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCCGACACTCTCCTCCCCAACCAGCTTCTAACAGTGTCTTCAGAACTAACTTCATCAAAGTCTTCCTCTCATGGTGGCGGCTATTATTCTCTCAAAATGCTTCAACAGCCTACTTCCTTAAGCCTTGCTCTCACTTACAATCTCCTTGAGACTTACGAAGCGTCAGATGAATCATACACCAACTATTCCTATTGGGAAGGCCCTGATATCTCCAATGTGACAGGGGAGGTTATAGCAGTTTTAGACCATGCTGGGAGCTTTGGGATTGTGTATGGAGACTCATCTGATGGAGCAGTATATGTGTACAAGAATGATGGTGATGATGCAGGCTTGCCTTCTGCAGTTCATCAATCTGCACCATCAACTGTTCTTAGGAGACTAACACTAGAAAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAAGTGAATGGGTCAAGGCAGTGGGTGCCACAATGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGGGTTTGCAATTTGGATAGAAGTAAGACAAAAGCCACTTGCGCTTGCTTGCCAGGTACTTCTGTAGTTGGTAGGGATGGCCAGTGCTATGAGAATTCATCTCTTGTGGGAAAATGCAATGGCAAGCATGAAAACCTGACATCCCAGTTTAAGATTTCAACGGTGCAGCAAACCAACTATTATTTTTCTGACTCGTCAGTAATAGCTAACTATAGTGATATTTCTAATGTGTCAAAATGTGGGGATGCTTGCTTGTCAGAATGTGATTGTGTGGCTTCTGTTTATGGGCTAAATGAGGAGAGACCATATTGTTGGGTGTTGAGGAGCTTAAGTTTTGGTGGTTTTGAGGATACAAGCTCAACTTTGTTTGTGAAGGTCAGAGCAAACGGGTCATGGACTAACGAAGGCCAAGAAGAAGGGTCTAATAGCTCTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTGTGAGCATGGTAGTCCTCATTGTTTTGCTGAGTTTATTACTGTATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCTGGTGCTCCAATGAATTTCACCTACCGTGATTTGCAGATTAGGACATGCAACTTTTCACAACTGATAGGAACAGGTGGATTTGGGAGTGTATACAAAGGAAGCCTAGGAGATGGTACTCTAGTGGCAGTGAAGAAACTGGACAAGGTTTTGCCTCATGGTGAGAAGGAATTTATTACTGAAGTAAACACTATTGGCTCAATGCATCACATGAATTTGGTTCGCCTGTGCGGCTATTGTTCTGAGGGATCACACAGGCTTCTGGTTTATGAGTTCATGAAGAATGGCTCCTTGGATAAATGGATCTTCCCTTCATATCAAGGGCGAGACAGATTGTTAGATTGGAGAACTCGTTTCAATATAGCCCTAGGTACTGCACAAGGAATTGCATACTTCCATGAGCAATGCAGGGATCGGATAATACATTGTGACATAAAACCGGAGAATATATTGGTAGACGAAAACTTTTGTCCTAAAGTATCTGATTTTGGACTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGGTGAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTGGTAATCGCCCTATAACTGTCAAAGCTGATGTTTACAGCTATGGGATGCTTCTTTTAGAGATCATTGGTGGTAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGATTTCTTCTATCCTGGTTGGGCTTACAAGGAAATGACAAATGGGTCAACAATTAAAGTGGCAGATAGAAGATTAAATGGGGCAGTTGATGAAGAAGAGCTAAAGAGAGCTCTGAAAGTTGCATTTTGGTGCATCCAAGATGAGGTTTCTATGCGACCAACAATGGGGGAAGTGGTAAGACTGCTGGAAGATTCGATCGACATAAATATGCCACCAATGCCACAAACAGTGCTAGAGTTGATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGAGTATAATCATTCCAGCTCATTCACTCTTACCAGCCATCTTACATCTCGTGCCACATGTAGCAATTCCACAATGTCACCAAGATAG 2601 0.4383 MANAASSSSSFFCYCFILALGLSSFGTCISAQIGLGSSLLSSKAQTWVSENGTFALGFTPAESDHRLFVIGVWFAQLPGDRTLVWSPNRDTPVSQDATLELDTTGNLVLMDGDSTIWTSNTSRAGVQAAVMEESGNFILHNSTNHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGGYYSLKMLQQPTSLSLALTYNLLETYEASDESYTNYSYWEGPDISNVTGEVIAVLDHAGSFGIVYGDSSDGAVYVYKNDGDDAGLPSAVHQSAPSTVLRRLTLEKNGNLRLYRWDEVNGSRQWVPQWAAVSNPCDIAGVCGNGVCNLDRSKTKATCACLPGTSVVGRDGQCYENSSLVGKCNGKHENLTSQFKISTVQQTNYYFSDSSVIANYSDISNVSKCGDACLSECDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANGSWTNEGQEEGSNSSSDGMGSAKEKAVIIPTVVSMVVLIVLLSLLLYYSVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLIGTGGFGSVYKGSLGDGTLVAVKKLDKVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQGRDRLLDWRTRFNIALGTAQGIAYFHEQCRDRIIHCDIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVGNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGAEDFFYPGWAYKEMTNGSTIKVADRRLNGAVDEEELKRALKVAFWCIQDEVSMRPTMGEVVRLLEDSIDINMPPMPQTVLELIEEGLDHVYKAMKREYNHSSSFTLTSHLTSRATCSNSTMSPR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00905 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Spst10g00905 866 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Spst10g00905 866 SUPERFAMILY Protein kinase-like (PK-like) 512 806 IPR011009 -
Spst10g00905 866 PANTHER OS07G0415500 PROTEIN 10 818 - -
Spst10g00905 866 ProSiteProfiles Protein kinase domain profile. 534 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00905 866 SMART blect_4 38 154 IPR001480 -
Spst10g00905 866 PIRSF SRK 2 860 IPR024171 GO:0004674
Spst10g00905 866 Pfam S-locus glycoprotein domain 271 341 IPR000858 GO:0048544
Spst10g00905 866 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 168 IPR036426 -
Spst10g00905 866 Pfam D-mannose binding lectin 82 169 IPR001480 -
Spst10g00905 866 SMART serkin_6 534 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00905 866 Gene3D Phosphorylase Kinase; domain 1 498 609 - -
Spst10g00905 866 FunFam serine/threonine-protein kinase PBS1-like 502 609 - -
Spst10g00905 866 CDD STKc_IRAK 540 807 - -
Spst10g00905 866 Pfam Protein kinase domain 537 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00905 866 Gene3D - 29 153 IPR036426 -
Spst10g00905 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 816 - -
Spst10g00905 866 Gene3D Transferase(Phosphotransferase) domain 1 610 821 - -
Spst10g00905 866 FunFam Serine/threonine-protein kinase 34 152 - -
Spst10g00905 866 CDD B_lectin 38 154 IPR001480 -
Spst10g00905 866 ProSitePatterns Protein kinases ATP-binding region signature. 540 563 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00905 Spst-Chr10 9862653 9867498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00905 517 816 Receptor kinase-like Gene Family AT5G20050 45.541 2.12e-78 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst10g00905 Pkinase 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00905 - - gmx:100794281 1558.12