Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00885 ATGCCTTGTCCATCTCTATCACCACTCTTCTTCTTCTTCCTCCTCCTCCTCCCCTCTGTACTCTCCCTCCCATTCTTCCCCTCCGACAACCTCACCCTCTACGGTGATGCCTTCTTCTCCCACAACGCCATCACTCTCACCACCCACCAACCCACCTGCTCCTCCTCCTCCATTGGCAGAGCCTTCTTCATCTACCCCCTCCGTTTTCTTGACCCCCAAACCAACTCCACCGCCTCCTTCTCCTCCCGCTTCTCCTTCTCCGTCCTCTCCTCCCCCTCCTGTCCCTCCGGTGACGGCCTCGCCTTCCTCATCACCTCCTCCACCCACTTCCCCGCCCTATCCATGGGCCTCCCCCAACCCTCCCCCTCCTCCTCCTTCTTCGCCGTTGAATTCGACACCACCTTCGACCCCTCCCTCGGCGACATCAACGACAATCACGTAGGTATTGACCTCAACAGTGCCTCCTCGTTCGCCTCCGTCGATGCCTTGTCCCGCGGCATTGACCTCAAGAGCGGGACAATCATCACTGCATGGGTGGAGTATCGCCATGCAATCAAGATGGTACGTGTTTGGCTGGCTTATTCCTCCACCAGACCTCCAATTCCTATTCTTGCTTCCCAAGTAGACCTTTCCGAGAGACTTAAAGACTTCATGCACGTCGGTTTTACCGCCTCCAATGGGGAGGGGTCAAGTGATTACCTTGTTCATCATTGGCAGTTCAAGATTTTCGGCTATGAGTCTCGCTCCATGGACGTGGTCGATGAAGGTGACTGTTTCTTGTGTTACGAAGGAGATTCTAAGAATTTTGGTTCAGGCTCGAGCATGGGGAAAAACGAGAAGAGGAAAAAGATTGGGGAGATGGCTCTTGGGTTGGGAGGGTTGACGGCGTTTGTGCTGTCGGTTTTGGCGGCGATGGTTGTGGTATGTGTTTTCTTGAGAAGGAAGAAACGTGGTGTTAAGAATATGGAGCAAGGGCGACGTTCTAGGCTGCAGACGAGTAAAGTTCCAACTAGGTTGTCACTTTCAGAGATTAAGTCTGCCACAATGGGGTTCAATCGTGAGAGGCTTGTTGGGGAGGGTGCTTCTGCCAAGGTTTATAAAGGGTATCTTCCCTTTGGAGGGGATGTGGCAGTGAAGAGATTTGAGAGGGAAAATGACGTGGATTGTTTACATAACCCTTTTGCGACTGAATTTGCCACCATGGTGGGTTACTTGCGCCACAAGAATTTGGTTCAGCTTAAGGGGTGGTGCTGTGAGGGGAATGAGCTGGTCCTGGTTTATGAGTTTCTTCCCAATGGGAGCCTCAATAAGGTTCTGCATAGGAACTTCAATTCTTCTATTGTTCTTTCGTGGAGACAAAGGCAGAATATTGTTCTTGGGGTTGCTTCTGCTCTCACCTACCTTCATGAGGAGTGTGAGAGGCAGATCATTCATAGGGATGTGAAGTCCTGCAATATAATGCTTGATGCGGATTTCAATGCCAAGCTTGGGGATTTCGGGCTTGCGGAAGTGTATGAGCACAGTTCCAGCACGAGGGATGCTACTATACCAGCAGGGACAATGGGCTATCTTGCTCCTGAATACGTTTATTCTGGTGTTCCTACTGAGAAGACTGATGTGTACAGCTTTGGGGTGGTGGTGTTGGAAGTGGCAACTGGAAGGAAGCCTGTGGAAGATGATGGCACCGTGGTTGTGGATTATGTGTGGAGCTTGTGGGAAAGGAGGAAACTCGTTGAGGCAGCTGATCCAAGGTTGATGGGGAATTTTGATGCACTAGATATGGAAAGGATGCTACTGGTGGGCCTTCTTTGTGTGCACCCTGATGATGACAAGAGGCCAAGAGTAAGAGAAGCAGCCAGAATTCTTAAGAAGGAAGCACCACTTCCTCTCTTGCCTCCAAGTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCTGATGGTACGTCTGAAACACAGTCTGTCGTTGGAGATTGGCACAGCACAGATGAAGCTCCTTATTTGACCCCTAGAAGCCAGTTTTACTAG 2025 0.5077 MPCPSLSPLFFFFLLLLPSVLSLPFFPSDNLTLYGDAFFSHNAITLTTHQPTCSSSSIGRAFFIYPLRFLDPQTNSTASFSSRFSFSVLSSPSCPSGDGLAFLITSSTHFPALSMGLPQPSPSSSFFAVEFDTTFDPSLGDINDNHVGIDLNSASSFASVDALSRGIDLKSGTIITAWVEYRHAIKMVRVWLAYSSTRPPIPILASQVDLSERLKDFMHVGFTASNGEGSSDYLVHHWQFKIFGYESRSMDVVDEGDCFLCYEGDSKNFGSGSSMGKNEKRKKIGEMALGLGGLTAFVLSVLAAMVVVCVFLRRKKRGVKNMEQGRRSRLQTSKVPTRLSLSEIKSATMGFNRERLVGEGASAKVYKGYLPFGGDVAVKRFERENDVDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHRNFNSSIVLSWRQRQNIVLGVASALTYLHEECERQIIHRDVKSCNIMLDADFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTEKTDVYSFGVVVLEVATGRKPVEDDGTVVVDYVWSLWERRKLVEAADPRLMGNFDALDMERMLLVGLLCVHPDDDKRPRVREAARILKKEAPLPLLPPSKPRVRIRPICPDGTSETQSVVGDWHSTDEAPYLTPRSQFY 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00885 674 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Spst10g00885 674 FunFam L-type lectin-domain containing receptor kinase S.6 314 429 - -
Spst10g00885 674 CDD lectin_legume_LecRK_Arcelin_ConA 28 244 IPR001220 GO:0030246
Spst10g00885 674 Gene3D - 21 254 - -
Spst10g00885 674 SMART serkin_6 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00885 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Spst10g00885 674 Gene3D Phosphorylase Kinase; domain 1 313 429 - -
Spst10g00885 674 SUPERFAMILY Protein kinase-like (PK-like) 331 622 IPR011009 -
Spst10g00885 674 Pfam Protein kinase domain 352 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00885 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 244 IPR013320 -
Spst10g00885 674 PANTHER - 44 632 - -
Spst10g00885 674 Pfam Legume lectin domain 27 243 IPR001220 GO:0030246
Spst10g00885 674 FunFam L-type lectin-domain containing receptor kinase VIII.1 430 640 - -
Spst10g00885 674 CDD STKc_IRAK 357 624 - -
Spst10g00885 674 Gene3D Transferase(Phosphotransferase) domain 1 430 627 - -
Spst10g00885 674 ProSiteProfiles Protein kinase domain profile. 351 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00885 Spst-Chr10 9566561 9568585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00885 9 673 Receptor kinase-like Gene Family AT5G42120 53.835 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst10g00885 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00885 - - gmx:100783805 1066.6