Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00881 ATGGATTTGGTCGAAGGCGTCGGAGAGAGCTCCTCGCCGCCACGCGCCTTCAGTGGTTACGGCAACTACGACATCCGCAACGACGTCTACAACCGCCTCCTCGCAACCGGTCACGACCAAGCCGTTTCCAATCCCGACTTCCGCGAACAGTTGGAAGCTCACTTCAATCGTTTGCCTCCGAGAGCTGAAGATGTTTTGTTACATCAAACGCTTCTTGCTCTGGCAAGGGACCCTGACAAGCGCCCTGTTTACCATATACGCTTCCTCGAGAATATTTCAACCAGAACAGATAGTGAAGATCAACAAATTTTAAGTACTCATTATAGCGCAGGATCATCTCATGCAACAAATGGGGTAGCTGTACCATCTGGGAAAAGTAAGATGAGGGATATTGCAAATGAGTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGACGTTAGAAAGAACTCCAAGGAGACAGAGGAAATATTTCTCACCGACAACTTTTTTCAGAGGCATTCAAGTATCCCAGTTCATGAGATAATATTTTCTGCTGTTGACAAGCCAAAGCTGTTAAGCCAGTTGTCTGCTTTGCTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTTTTCTCCACAACTGATGGCTATTCCCTTGACGTGTTTGTGGTTGATGGATGGCCAGTAGAGGAAACTGATGAATTGTATGATGCTATGGAAAAGGCTGTAGCAAGAAGTGAGGGGTCATGGTCTCGTTCTTCAAATTCTCATTCAGCTGTGGAGAAAACCTTAGCAACAGGGGGAAAATCAGGAGATTGGGAAATAGACAGGAGATTGCTAAAGTTAGGCGAAAAAATAGCGTCTGGATCCTCTGGAGATTTGTATCGCGGAGTTTATCTCGGGGAGGATGTTGCTGTTAAGGTTCTAAAATCTGAGCAATTGAATGATACCTTGGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTGAGTCCCATGCTGTATATGCCCGGGGGAAGTCTGTATGATTACGTGCACAAAAATCATAATGTCTTGGAGCTATCTCAATTACTAAAGTTTGCAATTGATGTCTGCAAGGGTATGGAGTATTTGCACGCAAACAACATAATTCACAGAGATCTGAAGACGGCTAATTTGCTGATGGATACACACAATGTTGTTAAAGTAGCAGATTTTGGAGTTGCTCGGTTCCTAAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCCTATGATCAGAAAGCAGATGTATTCAGTTTTTCCATTGTACTATGGGAATTAGTGACCGCAAAGGTACCATATGACACCATGACTCCACTACAAGCGGCTTTGGGTGTGAGACAGGGTCTGCGGCCAGAACTTCCGAAACATGGGCACCCTAGAATATTAGAATTGATGCAAAGATGTTGGGAAGCAATTCCAATCGACCGTCCATCCTTTAATGAGATAACGGTTGAACTGGAAAATCTTGTGCAAGAAATGGAGAAAGATTCAGAAGTGAATGGTGCTTGA 1557 0.4438 MDLVEGVGESSSPPRAFSGYGNYDIRNDVYNRLLATGHDQAVSNPDFREQLEAHFNRLPPRAEDVLLHQTLLALARDPDKRPVYHIRFLENISTRTDSEDQQILSTHYSAGSSHATNGVAVPSGKSKMRDIANEFEPCSKLEDLNLDVRKNSKETEEIFLTDNFFQRHSSIPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDELYDAMEKAVARSEGSWSRSSNSHSAVEKTLATGGKSGDWEIDRRLLKLGEKIASGSSGDLYRGVYLGEDVAVKVLKSEQLNDTLEDEFAQEVAILSPMLYMPGGSLYDYVHKNHNVLELSQLLKFAIDVCKGMEYLHANNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPRILELMQRCWEAIPIDRPSFNEITVELENLVQEMEKDSEVNGA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00881 518 PRINTS Tyrosine kinase catalytic domain signature 365 383 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 PRINTS Tyrosine kinase catalytic domain signature 328 341 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 PRINTS Tyrosine kinase catalytic domain signature 411 421 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 Pfam ACT domain 174 221 IPR002912 -
Spst10g00881 518 ProSiteProfiles ACT domain profile. 175 249 IPR002912 -
Spst10g00881 518 SMART serkin_6 276 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00881 518 Pfam Protein tyrosine and serine/threonine kinase 329 501 IPR001245 GO:0004672|GO:0006468
Spst10g00881 518 ProSiteProfiles Protein kinase domain profile. 276 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00881 518 Gene3D Transferase(Phosphotransferase) domain 1 330 509 - -
Spst10g00881 518 Gene3D Phosphorylase Kinase; domain 1 266 329 - -
Spst10g00881 518 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 509 - -
Spst10g00881 518 CDD STKc_MAP3K-like 282 502 - -
Spst10g00881 518 SUPERFAMILY Protein kinase-like (PK-like) 268 508 IPR011009 -
Spst10g00881 518 SUPERFAMILY ACT-like 174 242 IPR045865 -
Spst10g00881 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00881 Spst-Chr10 9455238 9478999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00881 24 509 MAP Kinase Kinase Kinase AT2G17700 46.717 5.92e-148 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst10g00881 PK_Tyr_Ser-Thr 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00881 - - gmx:100782737 926.391