Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00875 ATGGCATCAGATCACTCATCCCTCAACCAGACCAAATTTGTGCTCCCAAACAATGACCTTGAGCAACAAGAAACTCTGGAGGTTGAAAGCGAGGACTTTGATTACTCGAAGCGATCTCAGTGGCTACGTGCCGCTGTTCTAGGAGCCAATGACGGGTTGGTCTCAACGGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATAAAAGTCATGATCCTAACAGGGTTTGCAGGGCTAGTGGCAGGGGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCACAACTGGACATAGAAGTTGCTCAGATGAAAAGGGACAATGGCAGACACAGAAATGAAGAGGAAGATGAGAAGGAGAAAGAGAGTTTACCAAACCCTATGCATGCTGCAGCAGCCTCAGCTTTAGCATTTTCTGTTGGTGCAATGGTGCCTCTTCTTGCGGCCTCTTTCATAAGGGAGTATAAGGTGAGGCTTGGTGTGGTTTTGGGAGCAGTGAGTTTTGCTCTTGTGGTGTTTGGTTGGTTGGGGGCAGTGTTGGGTAAGGCTCCAACATTGAGGTCTTGTGTGAGAGTCTTGGTTGGGGGTTGGTTAGCCATGGCCATAACTTTTGGGCTAACCAAGTTGATAGGGTCAAGTGGTCTTTAG 657 0.4871 MASDHSSLNQTKFVLPNNDLEQQETLEVESEDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRDNGRHRNEEEDEKEKESLPNPMHAAAASALAFSVGAMVPLLAASFIREYKVRLGVVLGAVSFALVVFGWLGAVLGKAPTLRSCVRVLVGGWLAMAITFGLTKLIGSSGL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00875 218 Coils Coil 104 124 - -
Spst10g00875 218 CDD Nodulin-21 40 187 - -
Spst10g00875 218 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 213 IPR008217 GO:0005384|GO:0030026
Spst10g00875 218 MobiDBLite consensus disorder prediction 108 128 - -
Spst10g00875 218 Pfam VIT family 118 210 IPR008217 GO:0005384|GO:0030026
Spst10g00875 218 Pfam VIT family 42 125 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00875 Spst-Chr10 9332173 9332829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00875 17 218 Nodulin-like Gene Family AT3G43660 71.921 2.94e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00875 K22736 - gmx:100814343 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03351 4 73504296 73504970 Spst10g00875 10 9332173 9332829 PCT