Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00874 ATGGGGAAGAAAAAGCCTACTGCTAGGGACGAAGATAACGCTTCACAACAAGGCGGCGGAGGTGGAAAATCGAAGAAGAAGGGGGTGGTCATCGACGACGATGAGTATTCCATCGGAACGGAGCTATCAGAAGAGCCAGCGCCGACGATGGAAGAGATACCTGCTGCGGCTGGAAAGAAGAAAGGTAAGAAAGGTAATTCTAAAGGTAAGAGTAATGATGATGATGATGGTGATGGTGATGTTGATGATGGCGTGGATGTGCCTGAAGTTGTGTTTGCTGGGAAGAAGGGGAAAAACAAGAAAGGTGGTGGGAGTAGTGCGTTTACTGCATCTGGCTTTGGTTTGCTTGGTGATGAGGAAGGTGATGATGAAGATAAATCTGAAGAGGATGGACCAGTGGTTAGTTTCTCCGGTAAGAAGGCCTCGAAGAAAGGACGTGGTAGTTTGTTCAGTGCATCTGCTTTTGATGCCATTGGTGATGATGATGGTGGTGGTGAGGAGGAGGAGGATGAGCCGGTGGTTAGTTTTACTGGAAAGAAAAAGTCCTCGAAGGCTTCGAAGAAAAGCGGTGGTAGTTTGTTCGCAGCCGCGGCTTTTGATGCTATAGATGATGGTGGGGATGGGGAGGTGGTGGATGATAAGAATGATGATGATGAACCTGTTATTGCTTTCACGGGGAAGAAGAAGTCTTCGAAAGGGAGTAAGAAGGGTGGTGTTGTGTTTTCAGCTGTTGTTCTCGGTGAGATTGATGATGGAGAGGAGAAGGAGGATGGTGGCGGTGATGATGACGACGATATTGGACCAATTACTTTTACTGGCAAGAAAAAGAAGTCTTCCAAGAAGGCTGTAAGTTCCGGGAGCAAAGGTGTTTCTGTTGAGGATGATGTTAATGTGCCCGACTCTGGTAAGGATGGTGATGACAAGGATGAGGATGAGGATGGTGTTTCTATATTTTCATTTTCAGGTAAAAAGAAGTCCTCTAAAAAGAAGGGCAGCAGTACTACTGCCAAAGGGAGTGATGAAAATGTGGATGTAGTTCAGCCTGAGGCACCCAGTGCTGGTAGTGCTGATTCTGGCAACAGCAATCTTAATAATAGTGAAGGGGTTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCCCAAGAGGAGGAAGATTTGGATAAGCTTCTTGCAGAGCTTGGTGAGGCTCCTATACCAAAACCAACAGCTTCTGCACCACAGGATGATAAAGTTCAGCCTACTCCTGAAGTTGGTCCAGTTGCTGCTGATGCGTCTGGGGATAAGGAAGGTGAAGAGGAGGTCGTAGAGTCAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCTGCTGCAGCAGCAGCAGTAGGAAGTGCACCAGAAAATGAATTAGCAGAAGTTAAAGCTGAGGCAATTGAACCAAAGAAGAATGACTCAAAGGCTAAGGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCTGAAGAAAAGAAGAAAAGAGAAGAGGAAGAGAGGTTAAAGAAGGAAGAAGAGGAGCGACGCAGGCAAGAGGAACTTGAGAGACAGGCGGAAGAGGCTAAACGTAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCAGAAAAAAAAACAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCCCGCCGGTTGGAGGCAATGAGGAGGCAGATTCTCAATAACACTGGGGGTATGACTCTCCCTTCTGGGGACTCTGGTGCTCCAGCCAAAAAACCCATATATCAGACAAAGAAGGCAAAGCATAATAATAGAAATCAGAATGGTGCTGCTGCTGCTCAGACAGCTGAAATTGTGGAAGCAAAGGAGATTACCACTGATGTAGTTTCAGAGGCATCAGAAAACATTGAAGAAGTGGAGTCGATTCAGGTGGATGACAAAGTTGAACTTCCTGTGGCTGTTGAAGAGGATGCAGTGGAAGATGATGAAGAGGATGAATGGGATGCAAAAAGCTGGGACGATGTTAATTTGAATGCCAAAGGTGCATTTGCTGACGAAGAGGCTGACTCCGAATCTAAATCTGTTAGCAAAAAGGAGATTAAAAATGCCGCACCTACTCAGAATGCTGCAGGGGCTACTAATAAAACTGTTTCTAAGCCTGTGGCTGAAGAAACTGAAAGTGGAAAGCAAGCTAATGCTGTGATTGCCGACAGAAGAAAGTTAGCTGCCCCTCCTAAGCCTAATGATGAGAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCATGTGGATACTGGCAAGACCAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGAGGTATCACACAACAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGTGAAAGAACTAAGGAACTGAAAGCCGATGCAAAGCTGAAAGTTCCTGGTTTACTGGTTATTGATACCCCTGGACACGAGTCATTTACTAACTTGAGGTCTCGTGGTTCAGGCCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGGTTAGAGCAACAAACAATAGAATCATTAAATCTATTAAAAATGAGGAATACAGAATTCATCGTTGCCTTAAATAAGGTTGATAGGCTTTATGGATGGAAAACATGTCGCAATTCTCCAATTGTCAAAGCAATGAAACAGCAGACTAAGGATGTTCAAAATGAGTTCAATATGAGGCTCACTCAGATTATTACACAATTCAAAGAACAAGGGATGAATACCGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATTCCCGATCTGTTGTTACTATTGGTTCAATGGACCCAAAAAACAATGGTTGAGAAACTTACATACAGTGAAGAAGTGCAGGGTCCAATTGTTACGTCAATTCGAGCTTTATTGACACCTCATCCAATGAAAGAACTACGTGTCAAGGGAACATATCTTCATCACAAGGAAATTAAAGCTGCAATGGGTATTAAAATCACTGCCCAGGGCCTTGAGCATGCCATTGCTGGCACTGGTTTGTATGTGGTGAAGCCTGATGATGATTTGGAAGATGTCAAAGAAGCAGCCATGGAAGATATGCGGTCAGTCATGAGCAGGATTGACAGGACTGGTGAGGGTGTTTGTGTACAGGCATCTACCCTTGGTTCCTTGGAAGCATTGTTGGAATTTTTGAAAACTCCAGAAGTTAGTATCCCTGTTAGTGGTATAAGCATTGGTCCTGTACACAAAAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAAAAGCGAGAGTATGCTGCCATATTGGCATTTGATGTCAAAGTTACTCCTGAGGCTAGGGAACTGGCAGATGAATTGGGTGTGAAGATATTTATTGCTGATATCATTTATCATCTGTTCGATCAATTTAAAGCTTATATTGACAACATTAAAGAGGAGAAAAAGAAAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTTTTAAAATCTTACCAAATTGCATTTTCAACAAGAAGGACCCAATTGTTTTGGGAGTTGATATCCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGCATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATTGCATCCATTGAGAATAACCATAAACCTGTTGATTATGCAAAGAAGGGGCAGAAAGTGGCCATTAAGATTGTTGGCAGCAATCCTGAAGAGCAACAGAAAATGTATGGGAGACATTTTGAGATCGATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATTCTCAAAGCTAATTATCGGGATGATCTGTCTATGGAGGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 3981 0.4321 MGKKKPTARDEDNASQQGGGGGKSKKKGVVIDDDEYSIGTELSEEPAPTMEEIPAAAGKKKGKKGNSKGKSNDDDDGDGDVDDGVDVPEVVFAGKKGKNKKGGGSSAFTASGFGLLGDEEGDDEDKSEEDGPVVSFSGKKASKKGRGSLFSASAFDAIGDDDGGGEEEEDEPVVSFTGKKKSSKASKKSGGSLFAAAAFDAIDDGGDGEVVDDKNDDDEPVIAFTGKKKSSKGSKKGGVVFSAVVLGEIDDGEEKEDGGGDDDDDIGPITFTGKKKKSSKKAVSSGSKGVSVEDDVNVPDSGKDGDDKDEDEDGVSIFSFSGKKKSSKKKGSSTTAKGSDENVDVVQPEAPSAGSADSGNSNLNNSEGVAETSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPIPKPTASAPQDDKVQPTPEVGPVAADASGDKEGEEEVVESAAAKKKKKKKEKEKEKKAAAAAAAAVGSAPENELAEVKAEAIEPKKNDSKAKAADKKVPKHVREMQEALARRKEAEEKKKREEEERLKKEEEERRRQEELERQAEEAKRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNNTGGMTLPSGDSGAPAKKPIYQTKKAKHNNRNQNGAAAAQTAEIVEAKEITTDVVSEASENIEEVESIQVDDKVELPVAVEEDAVEDDEEDEWDAKSWDDVNLNAKGAFADEEADSESKSVSKKEIKNAAPTQNAAGATNKTVSKPVAEETESGKQANAVIADRRKLAAPPKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKAMKQQTKDVQNEFNMRLTQIITQFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVQGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKEAAMEDMRSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKREYAAILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVFKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNPEEQQKMYGRHFEIDDELVSHISRRSIDILKANYRDDLSMEEWRLVVKLKNLFKIQ 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00874 1326 MobiDBLite consensus disorder prediction 205 580 - -
Spst10g00874 1326 Coils Coil 502 573 - -
Spst10g00874 1326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 771 1025 IPR027417 -
Spst10g00874 1326 SUPERFAMILY Translation proteins 1193 1325 IPR009000 -
Spst10g00874 1326 NCBIfam small GTP-binding protein domain 776 915 IPR005225 GO:0005525
Spst10g00874 1326 CDD IF2_aeIF5B_IV 1197 1292 - -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 353 370 - -
Spst10g00874 1326 CDD IF2_eIF5B 774 984 - -
Spst10g00874 1326 FunFam Eukaryotic translation initiation factor 5B 1189 1326 - -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 718 744 - -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 703 717 - -
Spst10g00874 1326 PRINTS GTP-binding elongation factor signature 839 849 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 PRINTS GTP-binding elongation factor signature 855 866 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 PRINTS GTP-binding elongation factor signature 891 900 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 PRINTS GTP-binding elongation factor signature 775 788 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 Gene3D Translation factors 1189 1326 - -
Spst10g00874 1326 FunFam Eukaryotic translation initiation factor 5B 1076 1182 - -
Spst10g00874 1326 Pfam Elongation factor Tu GTP binding domain 775 983 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 MobiDBLite consensus disorder prediction 701 767 - -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 480 580 - -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 250 264 - -
Spst10g00874 1326 Gene3D Translation factors 991 1077 - -
Spst10g00874 1326 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 371 998 IPR015760 -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 1 189 - -
Spst10g00874 1326 Pfam Translation-initiation factor 2 1062 1175 IPR023115 -
Spst10g00874 1326 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 771 987 IPR000795 GO:0003924|GO:0005525
Spst10g00874 1326 MobiDBLite consensus disorder prediction 432 450 - -
Spst10g00874 1326 FunFam Eukaryotic translation initiation factor 5B 765 993 - -
Spst10g00874 1326 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1059 1188 IPR036925 -
Spst10g00874 1326 Gene3D - 1078 1182 IPR036925 -
Spst10g00874 1326 MobiDBLite consensus disorder prediction 383 398 - -
Spst10g00874 1326 Gene3D - 765 990 IPR027417 -
Spst10g00874 1326 Coils Coil 435 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00874 Spst-Chr10 9320450 9329251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00874 217 1326 Eukaryotic Initiation Factors Gene Family AT1G76810 62.669 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00874 K03243 - gmx:100814875 1642.09