Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00869 ATGGAAGGGAATTTGCCACAGGGAGGTATTATTCAAGGTGGAACATCTTTTGGTGGCTTTGATTTGCCAGGATCAATTCGTGTTCAGCATCAAGCACAACATCCCCATACCATGCACCAACATCAAACTCATCCGCGTCAAGGGTCTTCTGTACATTCCACAGTTCATGATGGTTTCCCTCTTACAATGGGAACCCTGCAGAATTGTGAACAAACCATTTCAATGGCAGAGTTTAGTAAAGGAGACAGAAGCAAAAACTCAGCGAGTGAGGAGGACGAGCCAAGCTTTAATGAGGATGGTGTTGATTGTCACCATGAAGCGAGTAGAGGGAAGAAAGGATCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAGACTTCTGATAACAGCTGTTTCTTATATTGGTGAGGATGTAACTGTTGATGGTGGTGGCAGTGGAAGAAGAAAATTTGCAGTATTACAGAAGAAGGGTAAATGGAAATCTGTTTCTAAGGTCATGGCTGAGAGGGGTTATCATGTTTCACCTCAGCAATGCGAGGATAAATTCAATGATCTCAATAAAAGATATAAAAAGCTTAATGATATGCTGGGGAGAGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCACTGTTGGATGTAATAGATTTTCTTACTGAGAAAGAAAAGGACGATGTTCGGAAAATATTAAGCTCAAAGCACTTGTTCTATGAGGAGATGTGTTCTTACCATAATGGTAATAGGTTGCATTTACCTCATGATCCTGCATTGCAACGTTCACTGCAGTTAGCGCTGCGAAATAGGGATGATCATGACAATGATGATATAAGAAGGTCCCATCATGACGATCACGATGAAGATGAACCAGATGTGGAAATTGATGATCATGATGATTTCGATGATAATTGTGCTTCTCATGGTGATAGTAGAGGAATATATGTACCATTAGGTGGATCTATGAAGAAATTGAAACAAGGCCAAGAAGATGGTAATACTTTTGGTAATTCTTTCAATTGTCAGGACTACAACAAAAGTTCATATCCCCATGGGCAGATGGTCCAATCTGATGCGAATCAAGGTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGATCGGTTCAGTTAGAGGAACAAAAGCTTCAAATTCAGGTTGAGATGCTGGAACTGGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGATCGGGAGTTGGAGAAGCTTAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAGCGAAAGGAAATGAGCACTGGCTTTAAATAG 1341 0.4087 MEGNLPQGGIIQGGTSFGGFDLPGSIRVQHQAQHPHTMHQHQTHPRQGSSVHSTVHDGFPLTMGTLQNCEQTISMAEFSKGDRSKNSASEEDEPSFNEDGVDCHHEASRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDVTVDGGGSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLTEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDIRRSHHDDHDEDEPDVEIDDHDDFDDNCASHGDSRGIYVPLGGSMKKLKQGQEDGNTFGNSFNCQDYNKSSYPHGQMVQSDANQGLPESMRAAWLQKQWVESRSVQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMSTGFK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00869 446 MobiDBLite consensus disorder prediction 83 115 - -
Spst10g00869 446 Coils Coil 408 440 - -
Spst10g00869 446 MobiDBLite consensus disorder prediction 30 59 - -
Spst10g00869 446 MobiDBLite consensus disorder prediction 269 287 - -
Spst10g00869 446 Gene3D - 121 193 - -
Spst10g00869 446 MobiDBLite consensus disorder prediction 1 59 - -
Spst10g00869 446 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Spst10g00869 446 MobiDBLite consensus disorder prediction 78 115 - -
Spst10g00869 446 PANTHER F16F4.11 PROTEIN-RELATED 1 443 - -
Spst10g00869 446 Coils Coil 380 400 - -
Spst10g00869 446 MobiDBLite consensus disorder prediction 269 305 - -
Spst10g00869 446 FunFam Sequence-specific DNA binding transcription factor 121 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00869 Spst-Chr10 9281097 9282437 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst10g00869 Myb_DNA-bind_4 5.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00869 - - gmx:100812134 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03362 4 73609165 73610499 Spst10g00869 10 9281097 9282437 PCT