Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00866 ATGCAGCTTGGAGACACCACACCCATGGAAACCTCTTCCGGTGAGGCTGTGGCGGCGCATGACGGTGGCGAGGTGATTATGATGGATGCAGCTTCCGGTGAAGAGAAGGGAAAAGAGGGTGGTTTAGAAGAAGAAGGTGACAAGATCAGCAACTCATGCGGTGGAAACCGATGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCTGTATTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTGCAAGGAAACTAGCAGAACTGGGTTACCACCGAAGCGCGAAGAAGTGCAAGGAGAAATTCGAGAATGTGTACAAGTACCATAAAAGAACCAAAGAGAGTAGAAGTGGGAAACAGGAGGGCAAAAACTATAAGTTTTTCGATCAATTACAAGCCCTTGAGAACCAATTCACTGTTTCTTACCCGCCAAAACCACAACCCACTTTGACAACAACAAACACGGTTGCCTTGTTACCTCCCCCAACAAGACCTAGTGACACAACAACAATCTCTTATGACACCACCACTGTTCCCTCCACAAACCCTACAGCAATATCTCCCTCTCCACTGCCACCACCACCACCACCACCTACGAATGCCACCACCACAGCCACCATCAGTTCTCCAACAATACTAACCAATCCTAGAGAGCCTCCTCAACCGAACAACAATAACCATAACACCCCTTACTCTTTGCCCAACATGAATAACCTCTTCTCCAACACTTCAACCTCTTCATCGACGGCCTCGGATGAAGACTTGGAAGAGAAGTACCGAAAGAAGCGAAAGTGGAAGGACTACTTCAGGAGGCTCACAAGGCAAGTCCTGGCCAAGCAAGAGGAAATGCAAAAGAGGTTCCTCGAAGCCATAGACAAAAGAGAGAGAGAACACGTGGCACAACAAGAGGCTTGGAGGATCCAAGAAATGGCAAGGATTAATAGAGAACATGAACTTCTTGTCCAAGAAAGATCAACGGCAGCAGCGAAAAATGCAGCAGTCATTGCTTTTCTGCAACAGTTATCTGGTCAGAACCAGAACCCCACAACACAAGCCGGTGCCAATTTCCTTCAACAACCACATTCACTACCACCTCCAACCCAAGTATCGAAAGTACAACCACCGCAACAACAATCTCCACAACCACAAACACCATTTGTGATGTCAAATAATAACAATATTGAAATTCAGAAAATGAATAATGGTCACAGTGCCGTTGCTGCTACTCCTACAACTGCTATTTCCGTTGTTGCTACTACTCCTACTTCATTGAGCTCCTTATCTTCTTCTAGGTGGCCAAAATCTGAAGTTCATGCTTTGATAAGGTTGAGGACGAGTCTTGAAACCCAGTACCAAGAAAATGGACCAAAGGCTCCACTGTGGGAGGACATATCAGCAGGAATGTTGAGGCTCGGATACAACAGGAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAAAGCAACAAGCATAGGCGCGAGGATAGTAAGACATGTCCCTATTTTCATGAACTCGATGCGTTATACAAAGAAAAGAGCAAAAATCAGAACCCCTTTGGCGCATCATTCCTCAACATGAAGCCACATGAGATGATGGAGCCCTTGATGGTGCAACCGGAGCAGCAGTGGAGACCTCCCTCCCAATACGAACAAGGTGCAGTGAAGGAGAACAATGAAAGTGAATACGTGAGAAAAGAAAGAGAGGAGGAAGAGGAAGAAGATGATGAAGTAGAAGACGATGGTAATGAAGAGGGAGATCTAGAGAGTGTGGAAGATGAAGGAGGTAGCCGTTATGAGATTGCGACAAATAAACTTTCATCAGTGGACACAGTTGAATGA 1890 0.4593 MQLGDTTPMETSSGEAVAAHDGGEVIMMDAASGEEKGKEGGLEEEGDKISNSCGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVARKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKQEGKNYKFFDQLQALENQFTVSYPPKPQPTLTTTNTVALLPPPTRPSDTTTISYDTTTVPSTNPTAISPSPLPPPPPPPTNATTTATISSPTILTNPREPPQPNNNNHNTPYSLPNMNNLFSNTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLEAIDKREREHVAQQEAWRIQEMARINREHELLVQERSTAAAKNAAVIAFLQQLSGQNQNPTTQAGANFLQQPHSLPPPTQVSKVQPPQQQSPQPQTPFVMSNNNNIEIQKMNNGHSAVAATPTTAISVVATTPTSLSSLSSSRWPKSEVHALIRLRTSLETQYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKHRREDSKTCPYFHELDALYKEKSKNQNPFGASFLNMKPHEMMEPLMVQPEQQWRPPSQYEQGAVKENNESEYVRKEREEEEEEDDEVEDDGNEEGDLESVEDEGGSRYEIATNKLSSVDTVE 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00866 629 MobiDBLite consensus disorder prediction 31 46 - -
Spst10g00866 629 CDD GT1 56 121 - -
Spst10g00866 629 ProSiteProfiles Myb-like domain profile. 432 496 IPR001005 -
Spst10g00866 629 MobiDBLite consensus disorder prediction 210 258 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 193 209 - -
Spst10g00866 629 FunFam Trihelix transcription factor GT-2 58 119 - -
Spst10g00866 629 SMART sant 436 498 IPR001005 -
Spst10g00866 629 SMART sant 54 116 IPR001005 -
Spst10g00866 629 MobiDBLite consensus disorder prediction 152 192 - -
Spst10g00866 629 Gene3D - 58 119 - -
Spst10g00866 629 Gene3D - 440 501 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 152 262 - -
Spst10g00866 629 Pfam Myb/SANT-like DNA-binding domain 56 142 IPR044822 -
Spst10g00866 629 Pfam Myb/SANT-like DNA-binding domain 438 525 IPR044822 -
Spst10g00866 629 CDD GT1 439 503 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 558 572 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 583 607 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 557 629 - -
Spst10g00866 629 ProSiteProfiles Myb-like domain profile. 56 114 IPR001005 -
Spst10g00866 629 MobiDBLite consensus disorder prediction 354 393 - -
Spst10g00866 629 Coils Coil 570 592 - -
Spst10g00866 629 MobiDBLite consensus disorder prediction 1 55 - -
Spst10g00866 629 FunFam Trihelix transcription factor GT-2 440 501 - -
Spst10g00866 629 PANTHER FI21293P1 32 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00866 Spst-Chr10 9246725 9249371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00866 54 559 Trihelix Transcription Factor Family AT1G76890 48.023 3.43e-141 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst10g00866 Myb_DNA-bind_4 9.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00866 - - gsj:114370603 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03365 4 73712233 73714784 Spst10g00866 10 9246725 9249371 PCT