Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00809 ATGGCGGAATCGGAGACAGGGACGCCGACGGCGGCGTCTGTGCCGGCGACGCCAGATACTCCGGGAGGACCGCTGTTCACGTCGCTGCGAGTGGACTCACTATCGCATCAGCGTGACTCGTTCACTAAGGCTCGATGCAAGTGTTTGCCAACTAAAGGAGACACCTGCTTCACTGAATTCTCCGTTGGTGGCGTTTCACTGCCCAATGTTTCTCTCACCCAAAAGGTTGGAGCAGAGTTTGTGGGGACTTTCATATTGATATTTGCAGCAACGGCGGGGCCAATAGTGAACAACAAGTACAATGGAGTGGAGACTCTGATGGGAAATGCAGCATGTGCAGGGTTAACAGTGATGTTCGTTATCCTCTCCATTGGCCACATTTCAGGTGCACATCTCAACCCATCCCTCACCATTGCCTTCGCAGCCTTCCGCCACTTCCCTTGGACCCATGTCCCTGCCTACATAGCAGCCCAAGTCTCTGCCTCCATCTGTGCCTGTTTCGCTCTCAAAGGTGTTTACCACCCTTTCCTCTCCGGTGGGGTCACTGTCCCTTCTGTCAGCGTTGGCCAGGCCTTTGCAACTGAGTTCATCATCACTTTCAATCTCTTGTTTGTCGTCACTGCTGTTGCCACTGACACTCGTGCGGTTGGTGAATTGGCTGGCATTGCTGTTGGGGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACGAGTGGTGGTTCGATGAATCCGGTGCGTACGTTAGGGCCAGCCGTTGCAGCAGGAAATTACAAGCACATATGGATCTATTTGGTGGCTCCGACGCTGGGTGCTCTCGCCGGTGCCGGGGTTTACACACTCGTCAAGCTGCGTGAGAACGAGGCTGAACCACCGCGACAGGTTAGGAGTTTCCGTCGGTAG 903 0.5415 MAESETGTPTAASVPATPDTPGGPLFTSLRVDSLSHQRDSFTKARCKCLPTKGDTCFTEFSVGGVSLPNVSLTQKVGAEFVGTFILIFAATAGPIVNNKYNGVETLMGNAACAGLTVMFVILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPFLSGGVTVPSVSVGQAFATEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYTLVKLRENEAEPPRQVRSFRR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00809 300 Pfam Major intrinsic protein 69 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 MobiDBLite consensus disorder prediction 1 15 - -
Spst10g00809 300 Gene3D Glycerol uptake facilitator protein. 58 295 IPR023271 -
Spst10g00809 300 FunFam Aquaporin NIP2-1 63 294 - -
Spst10g00809 300 SUPERFAMILY Aquaporin-like 70 292 IPR023271 -
Spst10g00809 300 CDD MIP 74 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Spst10g00809 300 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g00809 300 MobiDBLite consensus disorder prediction 1 28 - -
Spst10g00809 300 PANTHER AQUAPORIN NIP2-1 57 288 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00809 Spst-Chr10 8566499 8570430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00809 25 300 Major Intrinsic Protein MIP AT4G10380 75.177 1.28e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00809 K09874 - gmx:100804356 553.518