Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00798 ATGTCCATGCATTCCCACATTGAGAGAATTCTGTGGAGCGAGGGCCAAATTTCTCGCCGAGTCTCCGAGCTCGCCGCCAAAGTTTCCGCCGACTTTGCAGGTTCTTCACCAGCCCCCATAGTCGTCGGTGTGGCCACTGGTGCCTTCCTCTTCGTGGCAGATCTTGTTCGCAAGATCGATTTCTCCATACCCGTTGATTTCATTCGAGCTGAATCCTACGGCTCCAGAACTGAGTCGAATGGCGCACCAATCATTTCCTTCGATTTGAAGGTCGACATCAACGCTCGTCACGTCATCTTGGTTGAAGACATTGTAGATACTGGTCATACCTTGTCTAGAGTCATTAAGCACTTGAAATCAAAAGGAGCATCCTCTGTTTCTGTGTGCACTTTCCTTGATAAACCTTCAAGGAGAAAGGTGGATGTTCAGTTGGTGGGTGAAGGAAAATTCTACCGTGGATTTGAGTGCCCAGACTACTTTGTTGTAGGTTATGGAATGGATTTTGCCGAACATTACAGAAATTTGCCTTATATTGGTATTTTGAAGCCTGAACATTACAAGTAA 564 0.4628 MSMHSHIERILWSEGQISRRVSELAAKVSADFAGSSPAPIVVGVATGAFLFVADLVRKIDFSIPVDFIRAESYGSRTESNGAPIISFDLKVDINARHVILVEDIVDTGHTLSRVIKHLKSKGASSVSVCTFLDKPSRRKVDVQLVGEGKFYRGFECPDYFVVGYGMDFAEHYRNLPYIGILKPEHYK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00798 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 3 186 - -
Spst10g00798 187 Gene3D - 1 187 IPR029057 -
Spst10g00798 187 SUPERFAMILY PRTase-like 2 187 IPR029057 -
Spst10g00798 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
Spst10g00798 187 CDD PRTases_typeI 21 139 IPR000836 -
Spst10g00798 187 Pfam Phosphoribosyl transferase domain 16 168 IPR000836 -
Spst10g00798 187 NCBIfam hypoxanthine phosphoribosyltransferase 10 181 IPR005904 GO:0004422|GO:0006166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00798 Spst-Chr10 8480609 8485348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00798 1 186 PRT Gene Family AT1G71750 63.452 2.56e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00798 K00760 - gmx:100797406 320.087