Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00796 ATGGCGGTTGCGAAGAAGAAGACGCAGTCTTCGAGAAGTTGGATTATGTTCGATGCCACGGGGCAGGGTTCATTGCTCGACGTGGACAAATATGCGATCATGCATCGGGTTCAGATTCATGCGCGTGATCTCAGAATCCTTGATCCCTTGCTCTCTTACCCCTCCACCATTCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACCGCTGAAGAGGTATTATTGAGAGATCCATCAGATGAAAATGTGATCCCAGTTGTGGCGGAACTGCAAAGGCGTTTGCCTCGATCAAGTGCCGGCCTTCAACAGCAAGGAGATGGTAAAGAGTATCTTGGTGGCCAAAATGATGCTGAAGCAGCCGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAAGTTGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGAACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGGAAATTGAAGAGTGCAATGACAAGGCTGACTGGTAGAGTTCAGAAGGTCAGAGACGAGCTTGAACAATTGTTGGATGATGATGATGATATGGCTGACCTATACCTGTCAAGAAAAGCAGGTTTAGCATCACCGGTCAGTGGATCAGGTGCTGCAAATTGGTTTTCTGCATCCCCTACCATAGGATCAAAGATATCTAGAGCAAGTAGAGCAAGTCTAGCAACTGTTCGTTTTGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTTAGTGAAATTGATCATACCTTGAACAAATTAACCACACTGCGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAACTTGACAACCATCGTAATCAGCTGATTCAGTTGGAGCTCTTTCTTAGTTCTGGAACTGTTAGTCTAGCTTTCTATTCTTTGGTGGCTGCTATATTTGGCATGAATATGCCATATACTTGGAACGAAAAACATGATTACATGTTCAAATGGGTAGTTATTGTCTCTGGAGTATTTTCTGTTTTAATGTTTGTCATGATTGTGGTCTATGCGCGCAAAAAGGGATTAGTTGGATCATGA 1140 0.4272 MAVAKKKTQSSRSWIMFDATGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPSDENVIPVVAELQRRLPRSSAGLQQQGDGKEYLGGQNDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTGRVQKVRDELEQLLDDDDDMADLYLSRKAGLASPVSGSGAANWFSASPTIGSKISRASRASLATVRFDENDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVSLAFYSLVAAIFGMNMPYTWNEKHDYMFKWVVIVSGVFSVLMFVMIVVYARKKGLVGS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00796 379 MobiDBLite consensus disorder prediction 102 130 - -
Spst10g00796 379 FunFam Magnesium transporter MRS2-1 2 85 - -
Spst10g00796 379 CDD Mrs2_Mfm1p-like 14 376 IPR039204 -
Spst10g00796 379 Coils Coil 180 207 - -
Spst10g00796 379 Pfam CorA-like Mg2+ transporter protein 252 367 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst10g00796 379 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 315 367 IPR045863 -
Spst10g00796 379 Gene3D - 1 85 - -
Spst10g00796 379 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 377 IPR039204 -
Spst10g00796 379 Gene3D Magnesium transport protein CorA, transmembrane region 93 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00796 Spst-Chr10 8466578 8470222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00796 1 352 MRS2 Gene Family AT5G64560 80.791 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00796 K16075 - gmx:100810239 672.159