Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00790 ATGCGAGTTATACGGTGCATACATGAAATTCATACTTCTCTTGCTATTTTCCTGCCTCACCATGGCAAAGATAGGAAGGAGACACTCGTCTCTCATCGGACATGTCTTTCGTCGTCTCGCACAATAAGGGTTTTTGAGGATCACGACGACAGCGATGATGACCAGCTTCTATCAAGATATTTTTCTCAACCTCTCCTCTTCACCTTACCAGCACTCTCTATCAATGATGAAACTTCCCAATCTGTCTGGCTCCATCGCACCCTCTTTTGGTACACTTTCCCATTTCAGCTGCTTGACCTCTCCTCAAAAGCTCCTAATCATGGATACAGAGCTGAAAAAACATTAGGGGCATCAACTTTCAAAAGGGCTGCTCAGGCCTTGTGTACAAGGCTGAGATGCCAAATAGGAAATAGCAGTACAGCAGATGAAATAGTGGAGTCTTTTGCTCAAGGGATACAGATTATTGGATACATTCGGCATAGGAGCATAGTGAGGCTCATAGCTCATTGTCAAGAAGGTCTAGCTTACCTTCATCATGAGAATAGAGATGTCAAGTGCAATAACATACACCCCGACTCCAAATTCGAGGTATATCCGGCAGATTTTGGTCTTGCAATGCTAATGGATTCACTAAATTATCATCATGCAATTGGTTTCTATGAGTATAACTACTCCATGAACCTAACAGAGAAGAGTGATGTATCTAGTTATGGGGAGGTTTTGCTAGAGATACTAAGTGGTTGCAGTGCTGCTGAAGATGGCCAAACAGACACCTTTGAACCAGCTTGCATGTGTCCCAATGCACTAAGCACCCTAAGAACTGTGATTCTTGGTGCAGTATCTAAGGAGAGTAGCATCGCTGAGTCATGA 870 0.4345 MRVIRCIHEIHTSLAIFLPHHGKDRKETLVSHRTCLSSSRTIRVFEDHDDSDDDQLLSRYFSQPLLFTLPALSINDETSQSVWLHRTLFWYTFPFQLLDLSSKAPNHGYRAEKTLGASTFKRAAQALCTRLRCQIGNSSTADEIVESFAQGIQIIGYIRHRSIVRLIAHCQEGLAYLHHENRDVKCNNIHPDSKFEVYPADFGLAMLMDSLNYHHAIGFYEYNYSMNLTEKSDVSSYGEVLLEILSGCSAAEDGQTDTFEPACMCPNALSTLRTVILGAVSKESSIAES 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00790 289 Gene3D Transferase(Phosphotransferase) domain 1 146 284 - -
Spst10g00790 289 PANTHER OS01G0253100 PROTEIN 172 253 - -
Spst10g00790 289 SUPERFAMILY Protein kinase-like (PK-like) 100 253 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00790 Spst-Chr10 8421576 8425375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00790 85 247 Receptor kinase-like Gene Family AT1G75820 29.333 7.07e-15 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst10g00790 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00790 - - vra:106769750 144.05