Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00775 ATGCAGGAGATGATTTTTTGGTGGCACGGATACAACAGCGCTTCTTACAGAGAGGGTAATGGCCGAGCTTTTACAGATGCTGATGTGATTAAATTGCCCTACTTAGAAGCCATTGTGAAAGAAACATTGAGATTGCATCCAATTGGGCCCCTTCTTTCTTGGGCCCGTTTGTCCACGTCAGATGTCCAGCTCAGCAATGGAATGATGGTCCCAGCCAACACCACAACAATGGTGAACATGTGGGCCATAACTCATGACCCTAAAGTGTGGCACGAGCTACTTGTGTTCAAGCCAGAGAGGTTTATGCAGAGTGAAGGAGGGGTTGAAGTTGATGTTAGAGGTTTCAACCTTAGACTCGCACCATTTGGAGCTGGACGTAGGGTTTGCCCGGGTAAGAACCTAGGCCTTGTGTCTGTGAGCCTTTGGGTGGCTAACTTGGTCCATCGATTTCATTGGTTTCAAGACATGGCTAACCCAGTTGACCCAGCCGAGGTTCTTAAGCTATCTTGTGAGATGAAGAACCCCCTCATAGCTGTGGCTTCCCCATGTTTACTAATTAAAGCTCAAGATATTTTTCTAAGATATATATGCAATAGCATTATAGTAACATTTTCTTTCATGAAAATGTCGTGCAGCAAGAATATTTTCTTCCAAATTCTATGGTGTTTTTCCTTTATCAGTCTTAGTTCCCAAACACAGCGTCATTACAGTTTTGTTGTTAGAGAAGCCCAGTATACAAGACTTTGTTCCACAAAAAGCATATTGACTGTGAATGGAAACTTTCCAGGACCAACTATTAGAGTCAACGGAGGAGACACAATCTTCGTTGATGTTTACAACAAGGGCAACTACAATATTACTTTACACTGGCATGGAGTGAAGCAGCCAAGGAATCCATGGACAGATGGTCCTTCATACATCACTCAGTGCCCCATCCAACCCGGAATGAAATTCAGACAAAAGTTAGTTTTTTCTTTCGAGGAAGGGACCATATGGTGGCATGCTCATAGTGAATGGATAAGAGCCACTGTCTATGGTGCTATCTATGTCTATCCGACCAAGAATACTCCCTACCCTTTTCCTCAACCTGATGCTGAGATTCCAATCATATTTGGAGAATGGTGGATGAATGATGTCAACGAGGTCTTCAGACAGTCTTTTGAAACTGGAGGAGCCCCAAACGTATCTGATGCTCTCACTATAAATGGTCAACCTGGGGATCTCTTCCCTTGCTCAATGCCAGAAACGTTCAAGTTAAATGTGGAGCAAGGCAGGACTTATCATCTCCGAGTTATTAACGCAGCAATGAATCTCATTCTCTTCTTCTCCGTTTCCCAACATAACCTCACTGTTGTTGGTGCTGATGCTGTGTACACCAAGCCATTGACAAGGGATTACATTTGCATATCACCTGGACAAGCAATGGATGTGTTGTTGCATGCCAACCAAGAACCTAATCATTATTATCTAGCTGCGAGGGCATACTCAAGTGGGATTGGTGTTGCCTTTGATAACACCACAACCACTGCTAGAATAGAGTACAGTGGCAATTACACTCCACCTTCATCCCCTTCATTGCCAAACCTCCCCAACTTTAATGATACACAAGCAGCTTTGGAATTCATTACAAACTTGAGAGGCTTACCAGAGAGATACCCCACCCCGGTCCCAACAAACATCACAACTCAAATACTGACCACTATTTCTGTCAACACTTTGCCATGCCCTAATGGCAGAAACGACTGTCAGGGACCAAATGGAACCATTTTCTCTGCTAGCATGAACAACATAAGTTTTCAAAACCCCAACATTGACATTCTCAAAGCCTATTACTACCATATCAATGGGGTATATGAAACGGGATTTCCCAGATTCCCACCTTTTATATTTAACTTCACTGCAGATTTTTTGCCTCTAACATTGAATATACCAAAGCAAGGGACTAGGGTTAATGTGCTGAACTATGGTGCAATAGTTGAAATTGTTTTCCAAGGAACAAACGTTGTTGGAGGGATAGACCATCCTATACATCTCCATGGGTACAGTTTCCATGTTATTGGATATGGATTAGGCAATTTTAACCAAAGTAAAGATCCCATGAATTTCAATCTGGTTGATCCTCCTTATTTGAATACGGTGATTGTGCCAATAAATGGCTGGGCTGCCATTAGATTCGTGGCTGTAAACCCTGGGGTATGGTTTATGCACTGCCATCTAGAACGACATCAATCTTGGGGCATGGAGACAGTTTTTATAGTGAAGAATGGAAACTCTCCAAGTCAAATATTGCCATCACCGCCGCCAGACATGCCCCCATGTTGA 2322 0.4311 MQEMIFWWHGYNSASYREGNGRAFTDADVIKLPYLEAIVKETLRLHPIGPLLSWARLSTSDVQLSNGMMVPANTTTMVNMWAITHDPKVWHELLVFKPERFMQSEGGVEVDVRGFNLRLAPFGAGRRVCPGKNLGLVSVSLWVANLVHRFHWFQDMANPVDPAEVLKLSCEMKNPLIAVASPCLLIKAQDIFLRYICNSIIVTFSFMKMSCSKNIFFQILWCFSFISLSSQTQRHYSFVVREAQYTRLCSTKSILTVNGNFPGPTIRVNGGDTIFVDVYNKGNYNITLHWHGVKQPRNPWTDGPSYITQCPIQPGMKFRQKLVFSFEEGTIWWHAHSEWIRATVYGAIYVYPTKNTPYPFPQPDAEIPIIFGEWWMNDVNEVFRQSFETGGAPNVSDALTINGQPGDLFPCSMPETFKLNVEQGRTYHLRVINAAMNLILFFSVSQHNLTVVGADAVYTKPLTRDYICISPGQAMDVLLHANQEPNHYYLAARAYSSGIGVAFDNTTTTARIEYSGNYTPPSSPSLPNLPNFNDTQAALEFITNLRGLPERYPTPVPTNITTQILTTISVNTLPCPNGRNDCQGPNGTIFSASMNNISFQNPNIDILKAYYYHINGVYETGFPRFPPFIFNFTADFLPLTLNIPKQGTRVNVLNYGAIVEIVFQGTNVVGGIDHPIHLHGYSFHVIGYGLGNFNQSKDPMNFNLVDPPYLNTVIVPINGWAAIRFVAVNPGVWFMHCHLERHQSWGMETVFIVKNGNSPSQILPSPPPDMPPC 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00775 773 Pfam Multicopper oxidase 367 517 IPR001117 -
Spst10g00775 773 Pfam Cytochrome P450 19 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 ProSitePatterns Multicopper oxidases signature 2. 736 747 IPR002355 GO:0005507
Spst10g00775 773 PRINTS P450 superfamily signature 37 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 CDD CuRO_3_LCC_plant 617 756 IPR034289 GO:0005507
Spst10g00775 773 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PRINTS E-class P450 group I signature 79 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 PANTHER MULTI-COPPER OXIDASE 228 761 IPR045087 -
Spst10g00775 773 SUPERFAMILY Cupredoxins 360 550 IPR008972 -
Spst10g00775 773 Gene3D - 580 773 IPR008972 -
Spst10g00775 773 SUPERFAMILY Cupredoxins 230 375 IPR008972 -
Spst10g00775 773 SUPERFAMILY Cupredoxins 584 773 IPR008972 -
Spst10g00775 773 Pfam Multicopper oxidase 240 354 IPR011707 GO:0005507
Spst10g00775 773 ProSitePatterns Multicopper oxidases signature 1. 731 751 IPR033138 -
Spst10g00775 773 Gene3D - 219 352 IPR008972 -
Spst10g00775 773 CDD CuRO_1_LCC_plant 236 352 IPR034288 GO:0005507
Spst10g00775 773 SUPERFAMILY Cytochrome P450 19 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 NCBIfam laccase 233 773 IPR017761 GO:0046274|GO:0048046|GO:0052716
Spst10g00775 773 Gene3D - 363 549 IPR008972 -
Spst10g00775 773 CDD CuRO_2_LCC_plant 367 514 IPR034285 -
Spst10g00775 773 Gene3D Cytochrome P450 14 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g00775 773 Pfam Multicopper oxidase 643 756 IPR011706 GO:0005507|GO:0016491
Spst10g00775 773 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 122 131 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00775 Spst-Chr10 8130340 8134904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00775 18 181 Cytochrome P450 AT5G09970 67.073 1.27e-66 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00775 K05909 - gmx:100788301 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03445 4 74925559 74926628 Spst10g00775 10 8130340 8134904 PCT