Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00773 ATGTCTCAAACAGCTCAACTTTCCAAGACCAGGCCAATGGAAAACCTTCCACCATTGATTTACAAAAACCCCATTAGGAGAACCTCTAGGAGATCTACAATGTATCTTGGCGTGAGAAGAAGGGCGTGGGGAAGATATGCTGCTGAGATTAGGAACCCTTATACCAAAGAGAGATACTGGCTAGGCACATTTGACACTGCTGAAGAGGCTGCTATAGCCTATGATCTTTCATCTATCAAGATTTGTGGCATTAATGCTCGAACTAATTTTCATTACCCTTTTGTATCTCTTCCACCAACTCCTATGTCACTGCCTCCTCCACCGCCACCACCTACCCCGGAGTTGGATCAAGTGGTGGAGTTTGTCCAGAGATGA 375 0.4533 MSQTAQLSKTRPMENLPPLIYKNPIRRTSRRSTMYLGVRRRAWGRYAAEIRNPYTKERYWLGTFDTAEEAAIAYDLSSIKICGINARTNFHYPFVSLPPTPMSLPPPPPPPTPELDQVVEFVQR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00773 124 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Spst10g00773 124 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Spst10g00773 124 Pfam AP2 domain 36 81 IPR001471 GO:0003700|GO:0006355
Spst10g00773 124 CDD AP2 35 90 IPR001471 GO:0003700|GO:0006355
Spst10g00773 124 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 100 - -
Spst10g00773 124 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Spst10g00773 124 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Spst10g00773 124 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Spst10g00773 124 FunFam Ethylene-responsive transcription factor 2 33 92 - -
Spst10g00773 124 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00773 Spst-Chr10 8123688 8124062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00773 35 92 AP2-EREBP Transcription Factor Family AT1G12890 75.862 6.10e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst10g00773 AP2 1.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00773 - - gmx:100816937 193.741