Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00771 ATGTTAGAGTCACTCGAAAAGTGGTGTATTTTGGTGAGATCGGGTCGTGGGTGTGGTGTGTGGGATGGTAATGGTGGAGATTTGGCAGCTAGGTTTGATGGAGAGGAAGTTTATGGCTTTAGGTTTCATTTGGTGGAGGGAACTGTTTTCAAGCTTCTTTTGGTTTTTGTTTGTTGCTTCCTTGATTTTATTGAGTTTGGTGAAGCAGATTCCTTTTCCTTCTTGGATAGGAAGGGGGATGTATGGCTGTGTATTGCTCCAACCTATATGTTCCTGATTGATTGCATGTTCTTGTGTTGTGAAACAGGAGATGCTTTGCATAGTCTGAGGACTAATTTACAGGATCCTAACAATGTTTTGCAAAGTTGGGATCCAACACTAGTCAATCCATGTACATGGTTTCATGTAACATGCAACAATGATAACAGTGTTATAAGAGTTGATCTGGGGAATGCTGCTTTGTCTGGTCAACTTGTTCCGCAGCTTGGTCAGCTCAAGAATTTGCAGTATCTGGAACTTTACAGCAATAACATTACTGGCCCTATCCCAAGTGACCTAGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTACCTGAACCGATTCACTGGCCCAATCCCAGATTCATTGGGCAAGTTGTCGAAATTGCGTTTCCTCCGGCTTAACAACAACAGCTTATCAGGTCCTATTCCCATGTCGCTGACTAATATTACTGCTCTCCAAGTTCTGGATTTATCTAATAATCATCTGTCAGGAGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGTTTTGCAAACAACTTGGATCTATGTGGACCCGTCACTGGGCACCCATGTCCTGGCTCTCCTCCATTTTCTCCTCCTCCTCCTTTTGTCCCTCCACCTCCAATTTCTGCCCCGGGAGGTAATAGTGCCACTGGAGCAATAGCTGGAGGAGTTGCTGCTGGTGCTGCTCTATTATTTGCTGCACCTGCAATTGCATTTGCATGGTGGCGTAGAAGGAAACCACAAGAGTTTTTCTTTGATGTTCCTGCTGAAGAGGATCCTGAAGTTCATCTCGGACAGCTTAAAAGGTTTTCTCTACGAGAACTGCAAGTTGCAACAGATACTTTTAGCAATAAGAACATTCTTGGGAGGGGAGGATTTGGTAAGGTGTACAAAGGACGGTTGGCAGATGGTTCATTGGTGGCTGTGAAACGGTTGAAAGAGGAACGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATTAGCATGGCTGTGCATAGAAATCTCCTCCGACTACGAGGGTTTTGTATGACACCAACAGAAAGGTTACTTGTTTATCCCTACATGGCTAACGGAAGTGTGGCCTCATGCTTAAGAGAGCGTCCTCCACATCAAGAACCCCTGGATTGGCCAACTAGGAAAAGAATAGCTTTGGGATCTGCGAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTGAAAGCTGCTAACATATTGCTGGATGAAGAGTTTGAGGCTGTTGTTGGGGACTTTGGATTGGCCAAACTCATGGATTACAAGGACACCCATGTGACAACTGCTGTACGGGGCACTATTGGGCACATAGCTCCCGAGTACCTATCCACTGGTAAATCATCAGAGAAAACCGATGTTTTTGGTTATGGTATCATGCTTCTGGAGCTAATCACTGGACAGAGAGCTTTTGACCTCGCCCGGCTTGCAAATGATGATGATGTTATGCTGCTTGATTGGGTAAAAGGTCTTCTGAAGGAGAAAAAGCTTGAAATGTTGGTTGATCCTGATCTACAAAACAATTACATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTTTGCACACAAGGTTCCCCTATGGACAGACCTAAGATGTCGGAAGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTCCGGCAGGAGGTGGAGCTGGCCCCTCATCCCAATTCTGACTGGATCGTTGACTCGACCGAAAATCTGCATGCAGTCGAGTTATCTGGTCCAAGGTGA 2097 0.4526 MLESLEKWCILVRSGRGCGVWDGNGGDLAARFDGEEVYGFRFHLVEGTVFKLLLVFVCCFLDFIEFGEADSFSFLDRKGDVWLCIAPTYMFLIDCMFLCCETGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNRFTGPIPDSLGKLSKLRFLRLNNNSLSGPIPMSLTNITALQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISAPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQNNYIEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00771 698 CDD STK_BAK1_like 381 652 - -
Spst10g00771 698 FunFam Somatic embryogenesis receptor kinase 1 99 285 - -
Spst10g00771 698 Gene3D Transferase(Phosphotransferase) domain 1 452 669 - -
Spst10g00771 698 Pfam Leucine rich repeat N-terminal domain 103 139 IPR013210 -
Spst10g00771 698 SUPERFAMILY L domain-like 100 264 - -
Spst10g00771 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Spst10g00771 698 ProSiteProfiles Protein kinase domain profile. 375 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00771 698 FunFam Somatic embryogenesis receptor-like kinase 1 452 669 - -
Spst10g00771 698 Gene3D Ribonuclease Inhibitor 101 285 IPR032675 -
Spst10g00771 698 SUPERFAMILY Protein kinase-like (PK-like) 354 650 IPR011009 -
Spst10g00771 698 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Spst10g00771 698 FunFam Somatic embryogenesis receptor kinase 1 344 451 - -
Spst10g00771 698 Pfam Protein kinase domain 376 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00771 698 SMART serkin_6 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00771 698 Gene3D Phosphorylase Kinase; domain 1 344 451 - -
Spst10g00771 698 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 95 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00771 Spst-Chr10 8100185 8107016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00771 103 698 Receptor kinase-like Gene Family AT1G34210 92.953 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Spst10g00771 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00771 K13418 - gmx:100789884 1095.88