Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00763 ATGGACGGCAACCCCACCACCACTTCTTCCTCCTCATTACCTCCCGAGAATTTCAATTTCTCGCCCGATAACCCCTCCCCAATCACCCTCACTGCGAATCAGGTCAACAACTGTGCTCAAGCCCTCAACCTTTTGAAGGAGAAACTCCACGCTCCTCACGCCATCACTCAGGAGTTCGAACACCTGCAGGCGAACAGAATAACGCCGAGTGAGATGAGGAGAAGATGCAGCGTCGCTCTTGACGCTGTCAATTCGATCAAGAACCGATACACGGACGTGTTGCCATTTGACGAAAACAGGGTTGTTCTAAAATCTAGTACAGATTATAGACCTGCAGCACAGGGGTATATCAATGCAAGCTTGGTCTCGACCTCTTCCCCAGGCAATGTGTCACAGTTTGTAGCGACACAAGGTCCACTTCCACATACTTATGAGGATTTCTGGGAGATGATTATTCAATATCGCTGCCCTGCGATTATCATGCTTACTAGGTTGGTGGATAATTACAAGATGAAGTGTGGAGACTATTTTCAAGCGGAGGATGGACCTAGAGAAGTTGGTAATATTTCTGTTATTGGTAAATGGATGAACACTACTGAAACTTCATTGGTGCTGCGCCTTTTAGAGGTGAACCATAGAGAGGTAGAAGATGCTCCAATATCTGTTTTGCATATTCAGTATCCCGAATGGCCTGACCATGGAGTTCCCAAAGATACATTAGCTGTGCGTGAAATTTGGAAAAGATTATGCCATTTACCGCCAAACCTTGGCCCAATAGTGGTCCACTGCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTGTAGATATTGCTAACACAATAGCTGTGTTCAGGTCTCAGCGTATCGGAATGGTTCAGACACAGGATCAGTACATATTCTGCTATAAAGCTATCATAGATGAACTGGAAGACCTTGTATCTCAGCAGTAG 999 0.4535 MDGNPTTTSSSSLPPENFNFSPDNPSPITLTANQVNNCAQALNLLKEKLHAPHAITQEFEHLQANRITPSEMRRRCSVALDAVNSIKNRYTDVLPFDENRVVLKSSTDYRPAAQGYINASLVSTSSPGNVSQFVATQGPLPHTYEDFWEMIIQYRCPAIIMLTRLVDNYKMKCGDYFQAEDGPREVGNISVIGKWMNTTETSLVLRLLEVNHREVEDAPISVLHIQYPEWPDHGVPKDTLAVREIWKRLCHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSAVDIANTIAVFRSQRIGMVQTQDQYIFCYKAIIDELEDLVSQQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00763 332 CDD PTPc_plant_PTP1 116 318 - -
Spst10g00763 332 FunFam Tyrosine-protein phosphatase non-receptor type 12 32 332 - -
Spst10g00763 332 ProSiteProfiles PTP type protein phosphatase domain profile. 55 324 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 257 315 IPR000387 GO:0016311|GO:0016791
Spst10g00763 332 SMART ptp_7 221 323 IPR003595 -
Spst10g00763 332 SMART PTPc_3 54 326 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 Gene3D Protein tyrosine phosphatase superfamily 28 326 IPR029021 -
Spst10g00763 332 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311|GO:0016791
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 220 237 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 307 317 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 291 306 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 133 153 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 115 122 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 PRINTS Protein tyrosine phosphatase signature 258 276 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 MobiDBLite consensus disorder prediction 1 26 - -
Spst10g00763 332 Pfam Protein-tyrosine phosphatase 84 322 IPR000242 GO:0004725|GO:0006470
Spst10g00763 332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 326 IPR029021 -
Spst10g00763 332 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 47 326 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00763 33 330 Protein tyrosine phosphatase (PTP) family AT1G71860 67.224 8.77e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00763 - - gmx:548044 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00763 10 8024588 8028688 Spst10g00763 10 8024588 8028688 ECH