Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00754 ATGGACGTCGCATACCGGTTGAAGATAGAGGCCAAACAAAAGAGCGGAGGGAGCATCAAGAGGTTGTTTACGCCGCACGAATCACCACCGTCTGATCATGGATCAAGGGCGGCCGTACCTCAGGAGCGAATCATTTTAAAGGGCGTAACGGGGATAGCACACCCAGGGGAGATCTTAGCGGTGCTTGGGCCTTCGGGGAGCGGAAAATCGACGCTCCTAAACGCACTCGCTGGGAGACTCCATGGAAACGGCCTCACCGGGACAATCCTCGCCAACTCGAGCAAACTCAACAAATCGGTTCTCCGGAGAACCGGGTTCGTTACACAGGACGACATCCTCTACCCCCACCTCACCGTCCGCGAGACGCTAGTGTTCTGTGCCATGCTGCGCCTCCCGCGGGTGCTGCCGCGCGCGACCAAGGTCGCGGCGGCGGAGTCGGCGATCGCGGAGCTAGGGCTGAGGAAGTGCGAGCACACGATCATTGGAAACAGCTTCATCCGCGGCGTCTCCGGAGGGGAGCGTAAGCGCGTGAGCATAGCTCACGAGATGCTGGTGGACCCCTCGCTGCTGATACTGGACGAGCCTACCTCCGGTCTGGACTCGACGGCTGCGCATCGCCTCGTGATGACGCTCGGGTCACTGGCGAAGAAGGGGAAAAGTGTAATTACATCGGTGCACCAACCATCGAGCCGTGTGTACCAGATGTTCGATAAAGTTTTGTTGCTATCGGAAGGACAGTGTTTGTACTTCGGCAAAGGAAGCGACGCCATGCGGTACTTTCAGTCGGTTGGTTTCGCGCCGTCTTTTCCGATGAATCCGGCGGATTTCCTGCTCGATCTCGCTAACGCATCTGTTGAAGGACAGATGTAA 870 0.5782 MDVAYRLKIEAKQKSGGSIKRLFTPHESPPSDHGSRAAVPQERIILKGVTGIAHPGEILAVLGPSGSGKSTLLNALAGRLHGNGLTGTILANSSKLNKSVLRRTGFVTQDDILYPHLTVRETLVFCAMLRLPRVLPRATKVAAAESAIAELGLRKCEHTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAHRLVMTLGSLAKKGKSVITSVHQPSSRVYQMFDKVLLLSEGQCLYFGKGSDAMRYFQSVGFAPSFPMNPADFLLDLANASVEGQM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00754 289 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 284 - -
Spst10g00754 289 SMART AAA_5 55 246 IPR003593 GO:0016887
Spst10g00754 289 FunFam ABC transporter G family member 22 34 263 - -
Spst10g00754 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 262 IPR027417 -
Spst10g00754 289 Gene3D - 35 263 IPR027417 -
Spst10g00754 289 MobiDBLite consensus disorder prediction 18 38 - -
Spst10g00754 289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 269 IPR003439 GO:0005524
Spst10g00754 289 Pfam ABC transporter 46 197 IPR003439 GO:0005524
Spst10g00754 289 Pfam ABC-2 type transporter 226 285 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00754 Spst-Chr10 7872282 7876119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00754 56 283 Calmodulin-binding Proteins AT2G36910 27.350 1.00e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00754 K05681 - gmx:100812127 509.99