Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00749 ATGTCGAAGGATTTCACTGGTTTTAAGTCCAAAAGGGTGATGCCGCACGAGACCCCGGACCTAAAGGAGCACTACGTTGTAGGGAAGAAGGTGCTGGCAAAAGGGGACGTGACCACCACCTACGTGTGCACCCACAAGGAGACAGGGAAGGCTTACGCGTGCAAAACCATCCTAAAGGCGAAGCTGTTGAGCCAAGAGGAGTACGATGATCTGTGGAGGGAGATTCGCATCGTGCACCATTTGTCGGAGCACCCAAACGTGGCGAGGATACAGGGAAGCTATGAGGACAAGTTTGGGGTGCACCTTGTGTTGGAACTGTGTCGTGGGGGTGATCTTTTCGATAGGATCACTCAGAAGGGGCATTACAGCGAACGAGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAGGCGTGCCACTCTCTTGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTATTGTTTGATACCCGTGACAGTGATGCCACCATCAAGGTCATCGATTTTGGCTACTCTGTCTTCTTTAAGCCAGGAGAAACTTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCTGAGGTGTTGCGCAAACAATCTGGACCGGAATTGGACGTATGGAGTGCTGGTGTTATACTATACATCTTACTGAGTGGGGAACCACCTTTCTGGGATGTTGTTATCTTCTTTGTCCCGGAGTTACGTTCACTTTTTATATTATCTTCAGAAAGCGAAGCAGGAATTTTCAGAAAGATTTTAAAGGGAGATATTGATTTTGTTTCTGATCCGTGGCCAAGTATCTCAGAAAGTGCTAAAGAATTGGTGAAACAGATGCTAGTTAGGGACCCTAAGAAAAGAATTTCTGCTCATGAAGTTTTATGTAACCCTTGGATTGTTGATGATGCTGCTCCTGACAAACCTCTGGATTCTGCTGTTTTGACACGCCTAAAGTATTTCTCAGCAATGAATAAAATTAAGAAGATGGCATTATGGGTCATAGCAGAAAGACTTTCAGAGGAAGAAATAGGTGGATTGAAAGAGTTATTTAAAATGCTTGACAAAGACAACAGTGGGACAATAACTTTTGAGGAACTCAAGGAAGGTCTGAGAAATGTGGGCTGTAATCTTGTGGAATCTGAAATCAAATCCCTTATGGAATCGGCTGATATAGACAATAGTGGAACTATAGACTATGGTGAATTTCTTGCTGCTACACTGCACTTGAATAAGATGGAAAGAGAGGAAAACTTGCTTGCTGCTTTTTCTTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAGCAGGCTTGCAAGGAGTTCAGCCTAGGTGATGTCCATCTGGATGATATGATCAAAGACATTGATCAAGACAATGATGGAAGAATTGATTATTCGGAGTTTGCAGCAATGATGAGAAGGTGTGATCGAGATAGTAGAAGCAGAAACATGATAGGCAATTTGAACTTTAATATTGCAGAGATAGCTGGAATGGAAGATTCTTCTTCTTGA 1530 0.4346 MSKDFTGFKSKRVMPHETPDLKEHYVVGKKVLAKGDVTTTYVCTHKETGKAYACKTILKAKLLSQEEYDDLWREIRIVHHLSEHPNVARIQGSYEDKFGVHLVLELCRGGDLFDRITQKGHYSEREAAKLMKTIVGVVEACHSLGVIHRDLKPENLLFDTRDSDATIKVIDFGYSVFFKPGETFSDIVGTCYYMAPEVLRKQSGPELDVWSAGVILYILLSGEPPFWDVVIFFVPELRSLFILSSESEAGIFRKILKGDIDFVSDPWPSISESAKELVKQMLVRDPKKRISAHEVLCNPWIVDDAAPDKPLDSAVLTRLKYFSAMNKIKKMALWVIAERLSEEEIGGLKELFKMLDKDNSGTITFEELKEGLRNVGCNLVESEIKSLMESADIDNSGTIDYGEFLAATLHLNKMEREENLLAAFSYFDKDGSGYITIDELQQACKEFSLGDVHLDDMIKDIDQDNDGRIDYSEFAAMMRRCDRDSRSRNMIGNLNFNIAEIAGMEDSSS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00749 509 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Spst10g00749 509 FunFam Calcium-dependent protein kinase 5 112 309 - -
Spst10g00749 509 ProSitePatterns EF-hand calcium-binding domain. 428 440 IPR018247 -
Spst10g00749 509 Pfam Protein kinase domain 30 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00749 509 ProSiteProfiles EF-hand calcium-binding domain profile. 343 378 IPR002048 GO:0005509
Spst10g00749 509 SMART serkin_6 26 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00749 509 SUPERFAMILY Protein kinase-like (PK-like) 16 320 IPR011009 -
Spst10g00749 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Spst10g00749 509 ProSiteProfiles EF-hand calcium-binding domain profile. 453 484 IPR002048 GO:0005509
Spst10g00749 509 Gene3D - 308 486 - -
Spst10g00749 509 Gene3D Transferase(Phosphotransferase) domain 1 112 307 - -
Spst10g00749 509 CDD EFh 420 478 IPR002048 GO:0005509
Spst10g00749 509 CDD EFh 348 407 IPR002048 GO:0005509
Spst10g00749 509 SUPERFAMILY EF-hand 339 482 IPR011992 -
Spst10g00749 509 CDD STKc_CAMK 24 300 - -
Spst10g00749 509 ProSitePatterns EF-hand calcium-binding domain. 356 368 IPR018247 -
Spst10g00749 509 FunFam Calcium-dependent protein kinase 1 308 482 - -
Spst10g00749 509 Pfam EF-hand domain pair 348 408 IPR002048 GO:0005509
Spst10g00749 509 Pfam EF-hand domain pair 418 479 IPR002048 GO:0005509
Spst10g00749 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 474 - -
Spst10g00749 509 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Spst10g00749 509 Gene3D Phosphorylase Kinase; domain 1 28 111 - -
Spst10g00749 509 SMART efh_1 419 447 IPR002048 GO:0005509
Spst10g00749 509 SMART efh_1 347 375 IPR002048 GO:0005509
Spst10g00749 509 SMART efh_1 453 481 IPR002048 GO:0005509
Spst10g00749 509 SMART efh_1 383 411 IPR002048 GO:0005509
Spst10g00749 509 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Spst10g00749 509 ProSiteProfiles Protein kinase domain profile. 26 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00749 509 ProSiteProfiles EF-hand calcium-binding domain profile. 415 450 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00749 Spst-Chr10 7801488 7805839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00749 10 509 EF-hand Containing Proteins AT4G09570 69.661 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst10g00749 Pkinase 2.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00749 K13412 - gmx:547887 761.14