Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00748 ATGTTGGAGAGGGAGGAGGAGACTGGCAAAATGTCGAACGATTGCGGTGCATCAAAGTTCAAGAACGTGATGCCGCACGAGACCCCGGATCTAAAGGAGGACTACGTGGTGGAGCAGAAGGTGCTGGGAAAAGGGCACTTGGCCACCACGTACGTGTGCACCCACAAGGCTACAGGGAAGACTTACGCCTGCAAAACAATCCCAAAGGCGAAGCTGTTTAGCCAAGAGCAGTACGATGATGTCTGGAGGGAGATTCAGATCGTGAACCATTTGTCCGAGCACCCCAACGTGGCCAGGATACAGGGGAGCTATGAGGACAAGTTTGCCGTGCACCTTGTGATGGAACTGTGTCGTGGAGGTGAGCTTTTCTATAGGATCACTCAGAAGGGACATTTCAGCGAACGAGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTAGAGGCTTGCCACTCTCTTGGGGTCATCCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCGTGCCACTAATGCTACCATCAAGGTCATCGATTTTGGCTTCTCTGTCTTCTTTAAGCCAGGACAAACCTTCAGTGATATAGTAGGAACTTGCTACTATATGGCCCCGGAGGTGTTGCACAAACAATCTGGACCAGAAGTGGATGTTTGGAGTGCAGGTGTTATTCTGTACACCTTACTTAGAGGGCTCCCACCTTTCTGGGCAAGAACCGAATCAGGAGTTTGCAAACAGATTTTGCATGGAGAGCTTGATTTTTCATCTAATCCGTGGCCAAATATATCAGGAAGTGCTAAAGATTTGATAAAAAAGATGTTGGATAAAGACCCTAAGAAAAGAATTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTTGATGATAGTGTTGCCCCGGACAAACCTCTGGACCCTGCTGTTTTAACACGCCTAAAGCATTTCTCAACAATGAATAAACTTAAGAAGATGGCGTTACGTGTCATAGTAGAAAGACTTTCAGAGGAGGAAATAGGTGGATTAAAAGAGTTATTTAAAATGATTGATGAAGACAATAGTGGGACTATCACTTTTCAGGAACTCAAGGATGGTTTGAAAAGTGTGGGATCTAATCTCGTTGAGTCTGAAATTAAATCCCTTATGGATGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTCGCAGCTACACTGCACTTGAATAAGATGGAAAGAGAAGAGAATTTGGTTGCTGCTTTTTCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGACGAGGTTCAACAGGCTTGTACAGACTTTGGCCTTGGTGTTTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGGAGAATTAATTATGGGGAGTTTGTAACAATGATGAGAAAGGGTGGTGATCCATGTGTTGGTAGAAGCAGAAACACGAATGGCAACCTTAAAACTTCATTATTGAATGGTTTAGGAGTGTAA 1503 0.4418 MLEREEETGKMSNDCGASKFKNVMPHETPDLKEDYVVEQKVLGKGHLATTYVCTHKATGKTYACKTIPKAKLFSQEQYDDVWREIQIVNHLSEHPNVARIQGSYEDKFAVHLVMELCRGGELFYRITQKGHFSEREAAKLMKTIVGVVEACHSLGVIHRDLKPENFLFDTRATNATIKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLHKQSGPEVDVWSAGVILYTLLRGLPPFWARTESGVCKQILHGELDFSSNPWPNISGSAKDLIKKMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMALRVIVERLSEEEIGGLKELFKMIDEDNSGTITFQELKDGLKSVGSNLVESEIKSLMDAADIDNNGTIDYGEFLAATLHLNKMEREENLVAAFSYFDKDGSGYITIDEVQQACTDFGLGVLHLDEMIKEIDQDNDGRINYGEFVTMMRKGGDPCVGRSRNTNGNLKTSLLNGLGV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00748 500 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Spst10g00748 500 ProSiteProfiles Protein kinase domain profile. 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00748 500 SUPERFAMILY Protein kinase-like (PK-like) 23 319 IPR011009 -
Spst10g00748 500 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Spst10g00748 500 Gene3D Phosphorylase Kinase; domain 1 37 121 - -
Spst10g00748 500 Gene3D Transferase(Phosphotransferase) domain 1 122 301 - -
Spst10g00748 500 MobiDBLite consensus disorder prediction 1 23 - -
Spst10g00748 500 Pfam Protein kinase domain 38 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00748 500 FunFam Calcium-dependent protein kinase 1 302 476 - -
Spst10g00748 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Spst10g00748 500 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Spst10g00748 500 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Spst10g00748 500 SMART efh_1 377 405 IPR002048 GO:0005509
Spst10g00748 500 SMART efh_1 413 441 IPR002048 GO:0005509
Spst10g00748 500 SMART efh_1 447 475 IPR002048 GO:0005509
Spst10g00748 500 SMART efh_1 341 369 IPR002048 GO:0005509
Spst10g00748 500 ProSitePatterns EF-hand calcium-binding domain. 350 362 IPR018247 -
Spst10g00748 500 CDD EFh 342 401 IPR002048 GO:0005509
Spst10g00748 500 Pfam EF-hand domain pair 342 402 IPR002048 GO:0005509
Spst10g00748 500 Pfam EF-hand domain pair 412 473 IPR002048 GO:0005509
Spst10g00748 500 FunFam Calcium-dependent protein kinase 5 122 302 - -
Spst10g00748 500 SMART serkin_6 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00748 500 FunFam Aurora kinase A 29 120 - -
Spst10g00748 500 SUPERFAMILY EF-hand 333 473 IPR011992 -
Spst10g00748 500 Gene3D - 302 475 - -
Spst10g00748 500 ProSiteProfiles EF-hand calcium-binding domain profile. 447 478 IPR002048 GO:0005509
Spst10g00748 500 CDD STKc_CAMK 34 293 - -
Spst10g00748 500 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 468 - -
Spst10g00748 500 ProSiteProfiles EF-hand calcium-binding domain profile. 337 372 IPR002048 GO:0005509
Spst10g00748 500 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00748 Spst-Chr10 7794582 7799125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00748 22 500 EF-hand Containing Proteins AT1G35670 71.608 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst10g00748 Pkinase 3.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00748 K13412 - gmx:100811596 832.787