Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00730 ATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTTTCAGTTGCTGCCGATAGGGAAAGGAAAAAGAAGGGAAAGGTAATTAGGGAACATAACGTTTCTATGAGCAGTACTACTACTAGAAACTCCTATGAAAGCTATGAAGGGAAGATCTTTAGGCTTCTCCAAATGAGGGAGCAGATGCTAAGACAAGACCATAGGAGGAAAGGAGTTGTAGAAGATGGGAATGGCCTCCCTTTGATCCATTTGCTGCTCTCAACTGCCACTGCTGTTGATGACAACAACTTGGATTCATCCTTAGAGAATCTCACTGATTTATACCAAACTGTTTCCCTAACAGGTGACTCCGTTCAGCGTGTGGTGGCCTATTTTGCTGATGGTTTGGCCGCAAGGCTTCTCACAAGGAAATCCCCATTCTATGACATGCTCGTGGAGGAACCAACAACTGAGGAAGAGTTCCTTGCATTCACAGATCTCTACAGGGTTTCACCTTACTACCAATTCGCTCATTTCACAGCAAACCAAGCTATCTTGGAGGCCTTCGAGAAAGAGGAAGAGAGGAACAACCGTGCTTTGCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCCTCTCTCATTCAGTCTCTTTCAGAGAAGGCAACCACTGGCAACCGCATATCCCTCAGGATAACGGGATTTGGGAAGAACCTGAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTCGGCAGTCTTGTGTTTGAATTCCAAGGCCTGCTAAGAGGCTCAAGGGTCATCAACCTAAGGAAGAAAAAGAATGAAACGGTGGCTGTCAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACGTTGGGATTTGTTCATTCCCTTAACCCCTCCATTGTTGTGCTGGTGGAGCAAGAGGGTAGCAGGAGTCCTAGGAGCTTCTTGTCAAGGTTCACGGACTCCTTGCACTACTTTGCAGCCATGTTTGATTCCCTGGATGATTGCCTCCCACTAGAGAGTGCTGAGAGGTTGAGAATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACAATGATGTGGATGGTGTGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTTGCTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCGAAACTGTTGCTGAAGATGAGGACCCATTATTGTCCTCTCCAGTTTGAGGAAGAAGGAGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGCTGACCGTCTCAGCATGGCAATCAGTCTGA 1386 0.4538 MEDSEEDELLNLSLSVAADRERKKKGKVIREHNVSMSSTTTRNSYESYEGKIFRLLQMREQMLRQDHRRKGVVEDGNGLPLIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLVEEPTTEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEKEEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGVDCPKYERMETWKARMENHGFAATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQSV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00730 461 Pfam GRAS domain family 81 459 IPR005202 -
Spst10g00730 461 Coils Coil 351 371 - -
Spst10g00730 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 454 IPR005202 -
Spst10g00730 461 ProSiteProfiles GRAS family profile. 72 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00730 Spst-Chr10 7698551 7699936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00730 77 459 GRAS Transcription Factor Family AT1G14920 34.586 2.93e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst10g00730 GRAS 2e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00730 - - gmx:100809458 853.588