Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00728 ATGGAGGAGGCCAATGTTGTGATCAAGAATAACCTGTGCACAACTTGTCCTTCAGAAAGTGAGGATGGTGCCCTTCTATCTGCGATGATGCTTAGTACTACTGTAGTGTACCCTGCAGTTCTAAATGCTGCTATTCAGCTCAATTTGTTTGAGATCATAGCTAAGGAAACACCAAATGGTTGTTCATTGATGTCATCCCATGATATTGCTTCTAAGCTCCCAAACCAACACCCTGACTTGCCTAATAGGCTTGAACGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACTAGTTCCACTCGCACTGCACAACATGGTGCCACTGAGACAGTTTACGGACTCTCACAAGTTGGACAATACTTTGTTCCAGATGGCACTAGGGGCTCCTTCGCTTCATTCGCGACCTTTCTGTGTTACCCTGCACTCTCACCAGTTTGGCTGAATTTCAAGGAAGCAGTGGTTGGTGCAGACATTGACTTGTTCAAGAAACTTCATGGAGTAACAAAGTACCAGTACATGGAAAAGGATTTAAAAATGAACCAAGTTTTTAACAAGTCAATGGCGGACTTGTGTGTAACATATATGATTAGAATACTTGAAATATATACTGGATTTGAGGGAATATCAACATTGGTTGATGTAGGAGGTGGAAATGGACAAAATCTCAAAATGATCATTTCTAAATACCCTTTAATTAAAGGAATTAATTTTGATCTGCCCCAAGTGATCGAAAATGCACCACTACTTCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTACCGCAGGGTGACGCCATAATACTAAAGGCTGTATGCCACAATTGGTCTGATGAAAAATGCTTAGAAATTTTAAGCAATTGTCACAGAGCATTGTCTCCAACTGGGAAGGTGATTGTTGTGGAGTTCATATTGCCAGAAGAACCAGAACCAACTGAACAATCTCAGCTCTTTTCCACCCTTGACAACATTATGTTTATCACAGCTGGTGGAAAGGAAAGAACTCAGAAACAATACGAGAATTTGTGCAAGCTCTCTGGATTTTCAAATTTTCAAGTTGCTTCCCGCGCCTACTCTTGTCCGGGAGTGATGGAATTCTACAAATAA 1116 0.4131 MEEANVVIKNNLCTTCPSESEDGALLSAMMLSTTVVYPAVLNAAIQLNLFEIIAKETPNGCSLMSSHDIASKLPNQHPDLPNRLERMLRLLASYSVLTSSTRTAQHGATETVYGLSQVGQYFVPDGTRGSFASFATFLCYPALSPVWLNFKEAVVGADIDLFKKLHGVTKYQYMEKDLKMNQVFNKSMADLCVTYMIRILEIYTGFEGISTLVDVGGGNGQNLKMIISKYPLIKGINFDLPQVIENAPLLPGIEHVGGDMFARVPQGDAIILKAVCHNWSDEKCLEILSNCHRALSPTGKVIVVEFILPEEPEPTEQSQLFSTLDNIMFITAGGKERTQKQYENLCKLSGFSNFQVASRAYSCPGVMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00728 371 Gene3D - 36 199 IPR036388 -
Spst10g00728 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
Spst10g00728 371 PANTHER O-METHYLTRANSFERASE 29 360 IPR016461 GO:0008168
Spst10g00728 371 CDD AdoMet_MTases 211 308 - -
Spst10g00728 371 Gene3D Vaccinia Virus protein VP39 181 358 IPR029063 -
Spst10g00728 371 Pfam Dimerisation domain 40 92 IPR012967 GO:0046983
Spst10g00728 371 FunFam Caffeic acid O-methyltransferase 125 371 - -
Spst10g00728 371 FunFam Caffeic acid 3-O-methyltransferase 8 122 - -
Spst10g00728 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 369 IPR029063 -
Spst10g00728 371 SUPERFAMILY "Winged helix" DNA-binding domain 21 126 IPR036390 -
Spst10g00728 371 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Spst10g00728 371 PIRSF O-mtase 8 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00728 Spst-Chr10 7672083 7673894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00728 20 361 Monolignol Biosynthesis Gene Families AT5G54160 46.939 2.28e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00728 - - gmx:100787536 605.52