Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00718 ATGGAGTACAAACTCAAAACCTCACCACCAACGACAACATCTTCTCCACCAATCCCAATCCATCCCACTATGCTCTCAAACTCTCCTCCGTCTTCATCTTCTTCACCTCCCTCAAACTCTCCCACACCTTTCCCTTCACCCTCTCAGGGCTCTCCCTCTGCTGCTCCCCCCTCTCCGCCGCCGCCTGTGGTGGTTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGCAGGTGCGTGGAGAAGTGTGTCCTGGCTCCCTACTTCCCTCCCACTGATCCCCTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTACCAGAGTCCCAGAGAGCAGATGCTGTGAGCAGCATGGTGTATGAGGCAAATGCTAGGATCAGAGACCCAGTTTATGGGTGTGCTGGTGCAATATGCCAACTTCAGAAACAAGTTAGTGAGCTCCAAGCACAGTTGGCCAAAGCACAGGCTGAGCTAGTGAACATGCAGTGCCAACAAGCCAATTTGGTGGCTCTAATTTGCATGGAAATGAGTCAATCTCAGGAGCAGCACATGCTGCAGCCTCAACCTCACGGTGACATGAGCTGCTTCATAGAGGACAACAGTTTTGGGACTGCTTGGGAGCCTCTTTGGACATGA 663 0.5264 MEYKLKTSPPTTTSSPPIPIHPTMLSNSPPSSSSSPPSNSPTPFPSPSQGSPSAAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEQHMLQPQPHGDMSCFIEDNSFGTAWEPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00718 220 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Spst10g00718 220 Pfam Lateral organ boundaries (LOB) domain 67 164 IPR004883 -
Spst10g00718 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 66 191 - -
Spst10g00718 220 Coils Coil 146 173 - -
Spst10g00718 220 MobiDBLite consensus disorder prediction 1 59 - -
Spst10g00718 220 MobiDBLite consensus disorder prediction 34 59 - -
Spst10g00718 220 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00718 Spst-Chr10 7554002 7555323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00718 63 220 AS2 family AT1G07900 72.393 2.32e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst10g00718 LOB 2.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00718 - - gmx:100806667 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00718 10 7554002 7555323 Spst10g00718 10 7554002 7555323 ECH