Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00702 ATGGGGAGGAAAGGGTGGTTTTCTTCAGTGAAGAAAGTTTTCTTTTCTGAATCCAAAAAGGATCAGTTAGGATGTTTTGGGGCTTATCACCCAGAGGATCTAGAAGGGGCACCGATTGCCATTGTTCCATCACTTCCTCCTAGAAAAGACACCACAGCAAGAGGTGTAGCAGAGAATGAACAGAACAAGCAAGCCTTTTCTTTGGTTTTGGCTACTGCTGTGGCTGCAGGGGCTGCTGTGGCTGCAGCTGCGGAGGTATCTCGTCTCTCAAACACGCCTCGTCAAAATGTGACAGTGAAACAAGAAGTGGCTGCTATCACGATTCAAACAGCGTACCGTGGATATTTGGCAAGAAGATCCTTCCGTGGCTTGAGAGGTTTGGCGAGGTTGAAAACATTGGTGCAAGGGCAATCTGTTCAAAGGCAAGCGGCTACTACCTTGCAATGCATGCAAACTCTTTCACGGTTGCAGTCTCAGGTTCGTGCAAGGAAGGTCAGAATGTCTGAGGAGAATCAGGCTCTTAACCGGCAACTACAGCAGAAACGTGAAAAGGAAATGGAAAGATTGCAAGCTAATCAAATTGGAGAAAAATGGGATGATAGCTCGAAATCAAAGGAGCAAGTTGAGGCAAAATTGTTGAACAGACAAATAGCAGCTATGAGAAGAGAGAAGGCTATGGCTTATGCATCAACACATCAGCAAACATGGAGGAACTCTTCAAAGTCTGCTACAAATGCCACATTTATGGATCCATACAATCCCCACTGGGGCTGGAACTGGCTAGAGAGATGGATGGCTACAAGGCCATGGGAGGGCCAAAACACTACCTATCATATTGGTCATGCATCTGCCAAGAGTGTTTCAAGTAACACCATGTCAGTTGGTGAAATCACAAAATTATATACTCTCCGTGATCAGAACAATGGTTTCAAAACCTCCCCAGCAAACCAAAAAGCAACTCGTCCTTACAGCAACAATTCCCCTACAAAAGCAGCCTCAAAGATCCCACCAGCGAATGGAACAAGGGTTGGTTCATGGGGTGGCGATGGCGATTCAAAATCCATGTTCAACCAAATCTTAGAAAACAATCGCAGGCACAGCATTGGAGTGTCACAAATGAGAGATGACGAGAGCCATTCAAGCTCTTCACCTGCTTTTCCCAGTCACACAACACCATCAACCAAGGTTGCAAAGGCCAAGCCATCATCCAAAGTGAGAAGTGCATCCTCTGCTGCACCAAAAAATGGAACTCCTGAAAAAGCACCTCCAGCTCCTCTAAAGAAGAGACTCTCATTCCCTGCTTCTCCAGCTGGTACAAGAAGATATTCTGTTTCAACCAGGCCGGGAAATGTGGCTTCCTATAAGAGTGTTGTCACTGCTAACATCCCTGAGGAGAAAATGAGAGTGAGAAGGTAG 1416 0.4605 MGRKGWFSSVKKVFFSESKKDQLGCFGAYHPEDLEGAPIAIVPSLPPRKDTTARGVAENEQNKQAFSLVLATAVAAGAAVAAAAEVSRLSNTPRQNVTVKQEVAAITIQTAYRGYLARRSFRGLRGLARLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQALNRQLQQKREKEMERLQANQIGEKWDDSSKSKEQVEAKLLNRQIAAMRREKAMAYASTHQQTWRNSSKSATNATFMDPYNPHWGWNWLERWMATRPWEGQNTTYHIGHASAKSVSSNTMSVGEITKLYTLRDQNNGFKTSPANQKATRPYSNNSPTKAASKIPPANGTRVGSWGGDGDSKSMFNQILENNRRHSIGVSQMRDDESHSSSSPAFPSHTTPSTKVAKAKPSSKVRSASSAAPKNGTPEKAPPAPLKKRLSFPASPAGTRRYSVSTRPGNVASYKSVVTANIPEEKMRVRR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00702 471 Coils Coil 164 188 - -
Spst10g00702 471 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Spst10g00702 471 Gene3D iswi atpase 100 136 - -
Spst10g00702 471 MobiDBLite consensus disorder prediction 374 414 - -
Spst10g00702 471 MobiDBLite consensus disorder prediction 307 355 - -
Spst10g00702 471 SMART iq_5 100 122 IPR000048 GO:0005515
Spst10g00702 471 MobiDBLite consensus disorder prediction 371 447 - -
Spst10g00702 471 MobiDBLite consensus disorder prediction 307 334 - -
Spst10g00702 471 Pfam IQ calmodulin-binding motif 104 122 IPR000048 GO:0005515
Spst10g00702 471 PANTHER IQ-DOMAIN 5-RELATED 1 435 - -
Spst10g00702 471 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00702 Spst-Chr10 7307892 7310225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00702 1 443 IQD Protein Family AT5G03040 42.117 9.89e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00702 - - gmx:100807307 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00702 10 7307892 7310225 Spst10g00702 10 7307892 7310225 ECH