Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00699 ATGATTGAGAGGTCTACAAACCTTGACTGGTACAAGGGTCCAACCCTTCTTGAGGCTCTTGATCAGATCAATGAGCCCAAGAGGCCATCAGACAAGCCTCTTCGGTTACCCCTTCAGGATGTGTACAAGATTGGAGGAATTGGAACTGTACCTGTTGGACGTGTTGAAACTGGTGTCTTGAAACCTGGAATGGTTGTTACTTTTGCACCAACTGGACTTACCACTGAAGTTAAGTCCGTGGAGATGCACCATGAAGCCCTCACCGAGGCTCTTCCCGGTGACAATGTGGGATTCAATGTGAAGAATGTTGCTGTGAAGGATCTGAAACGTGGTTTTGTTGCCTCAAACTCCAAGGATGACCCTGCCAAGGAGGCTGCAAACTTCACATCTCAAGTTATAATCATGAATCACCCTGGACAGATTGGAAATGGATATGCACCTGTTCTTGATTGCCACACCTCCCACATTGCTGTCAAATTTGCCGAACTTGTGACTAAGATTGATAGGCGATCTGGTAAAGAGCTTGAGAAGGAGCCCAAATTCCTAAAGAATGGAGATGCCGGTTTTGTCAAGATGATTCCCACTAAGCCAATGGTGGTTGAAACCTTCTCCGAATATCCTCCACTTGGTCGTTTTGCTGTGAGAGACATGCGTCAAACTGTGGCCGTGGGAGTCATCAAGAGCGTGGAGAAGAAGGACCCCACTGGAGCGAAGGTCACCAAGGCTGCACAGAAGAAGGGCAAATGA 747 0.4766 MIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKGK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00699 248 Gene3D Translation factors 3 118 - -
Spst10g00699 248 Pfam Elongation factor Tu C-terminal domain 121 229 IPR004160 -
Spst10g00699 248 CDD EF1_alpha_II 30 120 - -
Spst10g00699 248 Gene3D Translation factors 123 230 - -
Spst10g00699 248 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 126 229 IPR009001 -
Spst10g00699 248 FunFam Elongation factor 1-alpha 29 116 - -
Spst10g00699 248 FunFam Elongation factor 1-alpha 123 230 - -
Spst10g00699 248 SUPERFAMILY Translation proteins 31 160 IPR009000 -
Spst10g00699 248 CDD EF1_alpha_III 123 226 - -
Spst10g00699 248 PANTHER ELONGATION FACTOR 1 ALPHA 12 247 - -
Spst10g00699 248 Pfam Elongation factor Tu domain 2 48 113 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00699 Spst-Chr10 7290165 7290911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00699 1 240 Eukaryotic Initiation Factors Gene Family AT5G60390 94.583 1.80e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00699 K03231 - gmx:100801611 488.804