Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00693 ATGATGGGTTACTCTTCAAAATTCTATCTTGTTTTGCTTATGTCCATTTGTGGAGTGGTTTCTTGGGCTTCCCCCATTGGAGATCAGAAGAGAGACAGAATTACTCAGCTGCCAGGACAGCCAAAGAATGTGGGGTTTGCTCAGTATTCTGGCTATGTGAATGTGAACGAGCAAAGTGGGAGAGCATTGTTTTACTGGTTGGTGGAGGCACCGGTGAGTCGTGGACCAAGGTCAAGACCACTAGTGTTGTGGCTCAATGGTGGCCCTGGATGTTCCTCTATTGCTTACGGTGCATCCGAGGAAATTGGTCCTTTTCACATTAGACCTGATGGCAAGTCGCTTTACTTGAACCCTTATGCTTGGAACAAGGTGGCAAATGTCCTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATTCGAATAAAACAACAGATCTGTATACATTTGGTGACCAGAGAACAGCTGCTGATGCATATGCTTTTCTTGTTAATTGGTTTGAAAGATTTTCTCAGTATAAGCATAGAGAATTCTACATTGCCGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCCCAAATTGTTTACCAGAAAAATAAGGGAATCAATAATCCAGTTATAAATTTAAAGGGATTTATGGTTGGTAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCTACGTATAGGATGCTAAAAATTGCCTGCAATTTTGGGTCCTCTCAGCATCCATCAGTACAATGCATGCAGGCTCTCAGAGTTGCAACTGTGGAGCAGGGAAACATTGATCCATATAGCGTTTATACACAACCTTGTAACGATACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAGGTTCAAAAGGCCTTTCATGCCAATGTAACTGGGATCCCTTATGCATGGAAAGCATGCAGTGATATTGTAGGGAACTATTGGACTGATTCTCCATTATCTATGCTTCCTATATATCAAGAACTTATTAGTGCTGGTCTCCGAATATGGGTCTACAGTGGAGACAGTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGATGCCTTGAAGCTACCTACCATCATCAATTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGTTGGAGTCAAGTTTATAAAGGGTTGACAATGGTTACAGTAAGAGGAGCTGGACACGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTCATTCTTTTTAGTTCATTCTTGGAGAATAAGTCCATGCCATCGACAAGTTAG 1383 0.4259 MMGYSSKFYLVLLMSICGVVSWASPIGDQKRDRITQLPGQPKNVGFAQYSGYVNVNEQSGRALFYWLVEAPVSRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFHIRPDGKSLYLNPYAWNKVANVLFLDSPAGVGFSYSNKTTDLYTFGDQRTAADAYAFLVNWFERFSQYKHREFYIAGESYAGHYVPQLAQIVYQKNKGINNPVINLKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLKIACNFGSSQHPSVQCMQALRVATVEQGNIDPYSVYTQPCNDTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKAFHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELISAGLRIWVYSGDSDAVVPVTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTMVTVRGAGHEVPLHRPRQAFILFSSFLENKSMPSTS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00693 460 FunFam Carboxypeptidase 359 453 - -
Spst10g00693 460 FunFam Carboxypeptidase 28 290 - -
Spst10g00693 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Spst10g00693 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Spst10g00693 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Spst10g00693 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Spst10g00693 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 440 IPR001563 GO:0004185|GO:0006508
Spst10g00693 460 FunFam Carboxypeptidase 309 456 - -
Spst10g00693 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Spst10g00693 460 SUPERFAMILY alpha/beta-Hydrolases 29 456 IPR029058 -
Spst10g00693 460 Gene3D - 312 348 - -
Spst10g00693 460 Gene3D - 359 452 - -
Spst10g00693 460 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Spst10g00693 460 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Spst10g00693 460 Pfam Serine carboxypeptidase 38 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00693 Spst-Chr10 7213514 7217777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00693 341 456 Calmodulin-binding Proteins AT2G22960 29.060 1.60e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00693 K16297 - gmx:100812000 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00693 10 7213514 7217777 Spst10g00693 10 7213514 7217777 ECH