Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g00693 | ATGATGGGTTACTCTTCAAAATTCTATCTTGTTTTGCTTATGTCCATTTGTGGAGTGGTTTCTTGGGCTTCCCCCATTGGAGATCAGAAGAGAGACAGAATTACTCAGCTGCCAGGACAGCCAAAGAATGTGGGGTTTGCTCAGTATTCTGGCTATGTGAATGTGAACGAGCAAAGTGGGAGAGCATTGTTTTACTGGTTGGTGGAGGCACCGGTGAGTCGTGGACCAAGGTCAAGACCACTAGTGTTGTGGCTCAATGGTGGCCCTGGATGTTCCTCTATTGCTTACGGTGCATCCGAGGAAATTGGTCCTTTTCACATTAGACCTGATGGCAAGTCGCTTTACTTGAACCCTTATGCTTGGAACAAGGTGGCAAATGTCCTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATTCGAATAAAACAACAGATCTGTATACATTTGGTGACCAGAGAACAGCTGCTGATGCATATGCTTTTCTTGTTAATTGGTTTGAAAGATTTTCTCAGTATAAGCATAGAGAATTCTACATTGCCGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCCCAAATTGTTTACCAGAAAAATAAGGGAATCAATAATCCAGTTATAAATTTAAAGGGATTTATGGTTGGTAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCTACGTATAGGATGCTAAAAATTGCCTGCAATTTTGGGTCCTCTCAGCATCCATCAGTACAATGCATGCAGGCTCTCAGAGTTGCAACTGTGGAGCAGGGAAACATTGATCCATATAGCGTTTATACACAACCTTGTAACGATACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAATCGTCCAGAGGTTCAAAAGGCCTTTCATGCCAATGTAACTGGGATCCCTTATGCATGGAAAGCATGCAGTGATATTGTAGGGAACTATTGGACTGATTCTCCATTATCTATGCTTCCTATATATCAAGAACTTATTAGTGCTGGTCTCCGAATATGGGTCTACAGTGGAGACAGTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGATGCCTTGAAGCTACCTACCATCATCAATTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGTTGGAGTCAAGTTTATAAAGGGTTGACAATGGTTACAGTAAGAGGAGCTGGACACGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTCATTCTTTTTAGTTCATTCTTGGAGAATAAGTCCATGCCATCGACAAGTTAG | 1383 | 0.4259 | MMGYSSKFYLVLLMSICGVVSWASPIGDQKRDRITQLPGQPKNVGFAQYSGYVNVNEQSGRALFYWLVEAPVSRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFHIRPDGKSLYLNPYAWNKVANVLFLDSPAGVGFSYSNKTTDLYTFGDQRTAADAYAFLVNWFERFSQYKHREFYIAGESYAGHYVPQLAQIVYQKNKGINNPVINLKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLKIACNFGSSQHPSVQCMQALRVATVEQGNIDPYSVYTQPCNDTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKAFHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELISAGLRIWVYSGDSDAVVPVTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTMVTVRGAGHEVPLHRPRQAFILFSSFLENKSMPSTS | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g00693 | 460 | FunFam | Carboxypeptidase | 359 | 453 | - | - | |
Spst10g00693 | 460 | FunFam | Carboxypeptidase | 28 | 290 | - | - | |
Spst10g00693 | 460 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 130 | 140 | IPR001563 | GO:0004185|GO:0006508 | |
Spst10g00693 | 460 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 166 | 191 | IPR001563 | GO:0004185|GO:0006508 | |
Spst10g00693 | 460 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 117 | 129 | IPR001563 | GO:0004185|GO:0006508 | |
Spst10g00693 | 460 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 423 | 436 | IPR001563 | GO:0004185|GO:0006508 | |
Spst10g00693 | 460 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 34 | 440 | IPR001563 | GO:0004185|GO:0006508 | |
Spst10g00693 | 460 | FunFam | Carboxypeptidase | 309 | 456 | - | - | |
Spst10g00693 | 460 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 423 | 440 | IPR033124 | GO:0004185 | |
Spst10g00693 | 460 | SUPERFAMILY | alpha/beta-Hydrolases | 29 | 456 | IPR029058 | - | |
Spst10g00693 | 460 | Gene3D | - | 312 | 348 | - | - | |
Spst10g00693 | 460 | Gene3D | - | 359 | 452 | - | - | |
Spst10g00693 | 460 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 180 | 187 | IPR018202 | GO:0004185 | |
Spst10g00693 | 460 | Gene3D | alpha/beta hydrolase | 28 | 290 | IPR029058 | - | |
Spst10g00693 | 460 | Pfam | Serine carboxypeptidase | 38 | 453 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g00693 | Spst-Chr10 | 7213514 | 7217777 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst10g00693 | 341 | 456 | Calmodulin-binding Proteins | AT2G22960 | 29.060 | 1.60e-12 | 64.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g00693 | K16297 | - | gmx:100812000 | 919.072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst10g00693 | 10 | 7213514 | 7217777 | Spst10g00693 | 10 | 7213514 | 7217777 | ECH |