Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00662 ATGGAAATCACCATCACATTAAGAGAAGTAATCAAACCATCTTTGCCCACACCAGATGACCACAGATTCTTCCCACTCTCTTTGTTTGATCAGCTTCAACTTGTCACCTATTTGCCAATGGTTTTGTTTTACCCCAAGAAAGAAGGGTTCTCGGAACCCTCTCATATTTGTTCTCAGTTGAAACGGTCACTATCCGAGACACTAACCATTTTCTACCCTGTGGCAGGCAGAAGAGAAGACCACACCTTCATCACTTGCAATGATGAGGGTGCTCTTTACTTGGAGGCCAAGGTGAACCATACCATGGTTGAGTTTCTCACACCACCCAAGCTAGAATTTCTAAACAAATTGCTCCCATGTGAGCCTAACAAGATGCACTCACACACAGAAGCCTTGCCCCAAGTACTTGTACAAGTCAACATATTTAGTTGTGGTGGAATAGCTATAGGTACATGCAATCTGCACACTCTTCTTGATGGATGCTCTGGTAGCCTCTTCCAAACTACTTGGGCTGCTACCTGCAGTGGCTCCAGGGAGAAAGTTCCCTCTCCTGATTTCAGTTCTGCTTCCTTTTTCTTTCCACCGGTGAATCATTTGAGTTTTCATGACCATGTTGATCAAAATAATGAAGATTCAAGTGCACAAAAAATGTGCACCACTAGGAGATTTGTTTTTGGTGTAGAAACCATCGACATTCTAAGAGCTGAAGCAAAAGATGACGATGATGATGATGAACCCTCAAAGCCTCTTACCCGATATGAAGCACTGGCTGCTTTCATTTGGAGGCACATGACACTTGCATGCAAGATGGAATATGGGGATAGCACAACACCAACAGTGGCCATTCATATTGCGGACATGAGGAGGAGAATGGGTGAACCTTTCTCTAGATACACAATAGGCAACATTTTGTGGCCAGTGATGGTGTTTTGTGAAACAATGAATGCAGAGACTAGTGGTAGATATTTGGTTAGCATTGCTAGGGAGAAATTTGGAAAGCTTTCAAGGGAATTGTTTCTAAGAGTGAAAAATGATCCCAGTATCTTAGGGAGTAGTGAGTGTGTGGATCTGCCTGAGGGTATAAAAACAAAAAGTCCAATTCCAGTTGTCTTTACAAGTTGGTGTGGTTTGAATTTCAGTGAGCTGGATTTTGGTTGGGGGAAGCCTTTGTGGGTTGGTGTGAGAGGAGGGGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGCAGGCATGGAAGCTTGGTTGACAATGGAAATGCAACATATAGCTAACTTGGAAGAAGACATGGAGTTTCTCAGATTAGCTTTGCCTAATCCTAGTCTTTCAAACATTTAG 1347 0.4298 MEITITLREVIKPSLPTPDDHRFFPLSLFDQLQLVTYLPMVLFYPKKEGFSEPSHICSQLKRSLSETLTIFYPVAGRREDHTFITCNDEGALYLEAKVNHTMVEFLTPPKLEFLNKLLPCEPNKMHSHTEALPQVLVQVNIFSCGGIAIGTCNLHTLLDGCSGSLFQTTWAATCSGSREKVPSPDFSSASFFFPPVNHLSFHDHVDQNNEDSSAQKMCTTRRFVFGVETIDILRAEAKDDDDDDEPSKPLTRYEALAAFIWRHMTLACKMEYGDSTTPTVAIHIADMRRRMGEPFSRYTIGNILWPVMVFCETMNAETSGRYLVSIAREKFGKLSRELFLRVKNDPSILGSSECVDLPEGIKTKSPIPVVFTSWCGLNFSELDFGWGKPLWVGVRGGDQETLPNVAVIMETDAGMEAWLTMEMQHIANLEEDMEFLRLALPNPSLSNI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00662 448 Gene3D - 1 202 IPR023213 -
Spst10g00662 448 Pfam Transferase family 1 435 - -
Spst10g00662 448 PANTHER F21J9.9 5 437 - -
Spst10g00662 448 Gene3D - 203 432 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00662 Spst-Chr10 6859556 6860902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00662 1 431 Monolignol Biosynthesis Gene Families AT5G48930 25.110 1.55e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00662 - K13065 gmx:102668997 775.007