Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00657 ATGTGCAAATCCAAGAAGAGCACCACTGCGGTACAACCCCGAACCAGAAGAAATACCAACGACACCAACACAAACATGGCCAATTCCCCTCGTCCGCACCGAACGCGAACCCTAACATCGCCGTCGTCGAACTACGATACCTCCACCAGCGATGTCCCAATCACAGAATCAAGAAGCTACGTATTCGAAAACAACAACAACGACTTATTCGAGTGGTCAAAAACCTCGTCCATATCAAGCCGCGCCTCTCTCTCAAGCCTCAAAGACACGCTCCCTGAAAACCCTAACATCTACCACTTCTCCGAGATCTCCGCCGCCACTGCCAACTTCTCCGCCCCACGCCTCTCTTCCTCCTCCTGGCGCTGTCTAATTCGCCACCGCGATGTTGTTGTCTCTCGCCGCAACTTCCGCCAACAAATCGACCTCCCGGAGCTCAGCCACCGCCTCGCCCTCATCTGCCGGAGCCATCACAGCAGCCTCGTCAAACTCCTCGGCGCTTCCGTCTCCGGCACCGTCATCTTCCTCGTCTACGAATTCGTCCCCGGCGCCAGTCTCGCCGACTGCCTCCGTAACCGCCGGAATCCTAGCTTCACCGATCTCGCCACGTGGACCTCGCGTATGCAGATCGCTTCCGACGTCGCGCACGGCCTCGATTACATCCACAATTTCTCCGGTTCTAGTTCGGATTGCGGTTCAGGTTTCGTTCACAATCACATCAAGAGCTCCAGCATTGTTATCACGGAGGATAATTTGCGCGGGAAAATCTGCCACTTTGGCGCGTCGGATCTCTGCGGCGAGGCTGTTTCTGGCTCCGGAGAGGAATCCGGCGGGCGTAGGGTGAGGATCGAGGGGACGAGAGGGTACATGGCGCCCGAATTTCAGGTCAGTGGCGTCGCGACGAAGAAGTGCGACGTGTACGCGTTCGGCGTGGTGGTTCTGGAGCTACTGAGCGGCGAAGAGGCAGTGAAATTCGAATTCAACGACGACGGCAGTTATCTGAGGACGAGCGTGGTGGATACGGCGAGAGTGGCGGCGGGGGAATACGGCGGTGTGAGGAAGTGGGTGGATAAGAGGCTGAGGGACTCTTTTCCGGTGAATGTGGCGGAGAGGATGATTCGGCTGGGATTGGACTGTGTCGGGAGTGACCCGGACGAGAGACCGGACATGGATCGGGTATCGATTGAGGTGTCAAAGTTGTATCTGGAATCGAAGGAGTGGGATCAGAAATTGGGAACCGATATTGACTTGTCCGTCTCGTTGGCCCCACGGTGA 1272 0.5684 MCKSKKSTTAVQPRTRRNTNDTNTNMANSPRPHRTRTLTSPSSNYDTSTSDVPITESRSYVFENNNNDLFEWSKTSSISSRASLSSLKDTLPENPNIYHFSEISAATANFSAPRLSSSSWRCLIRHRDVVVSRRNFRQQIDLPELSHRLALICRSHHSSLVKLLGASVSGTVIFLVYEFVPGASLADCLRNRRNPSFTDLATWTSRMQIASDVAHGLDYIHNFSGSSSDCGSGFVHNHIKSSSIVITEDNLRGKICHFGASDLCGEAVSGSGEESGGRRVRIEGTRGYMAPEFQVSGVATKKCDVYAFGVVVLELLSGEEAVKFEFNDDGSYLRTSVVDTARVAAGEYGGVRKWVDKRLRDSFPVNVAERMIRLGLDCVGSDPDERPDMDRVSIEVSKLYLESKEWDQKLGTDIDLSVSLAPR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00657 423 Gene3D Phosphorylase Kinase; domain 1 86 179 - -
Spst10g00657 423 SUPERFAMILY Protein kinase-like (PK-like) 138 394 IPR011009 -
Spst10g00657 423 Gene3D Transferase(Phosphotransferase) domain 1 181 417 - -
Spst10g00657 423 ProSiteProfiles Protein kinase domain profile. 109 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00657 423 PANTHER OS09G0572100 PROTEIN 1 423 - -
Spst10g00657 423 Pfam Protein tyrosine and serine/threonine kinase 140 392 IPR001245 GO:0004672|GO:0006468
Spst10g00657 423 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00657 Spst-Chr10 6792263 6793534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00657 93 411 Receptor kinase-like Gene Family AT1G51940 32.551 1.67e-45 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst10g00657 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00657 - - gmx:100820374 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00657 10 6792263 6793534 Spst10g00657 10 6792263 6793534 ECH