Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00654 ATGTGTAGGTGGAGTATCAGCTCAAAGCATTTGTGGGTGCCCATTGTGGTCTTGACCTTGTTCCTTTGGATGAGGCAGTTGCAATGCCAACAAGTCAATGACTATGACCAAATTGATAGCCCTGCTGTTCTTCCCCTCGTTACTCAGCTTGTATATAGTCAAATCTCCAATTTGACATCAATTATCAGCCAGGAAATAAGCAGAGAGTCCTCTTTCTGTGTCAAAGATCCGGATGCTGATTGGAATCAGGCATTTAATTTTGCATCCGATTTGGACTTCTTGGCATCTTGCATTAAGAAGACTAGAGGAGATATTGTAAAACGTTTGTGTACAGCAGCAGAAGTGAAGTTTTTCTTAAATAGTTTATTGGGGACATCTGTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTCCCACAAGCCAGAAAGTTGACCTTAAAGATTCCAAGGAGATACCTGCAAGAACTTCAAACTGTCAAGCATGTTGCGAAGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAAAACAACTGGCATATGTGAACCATATTTTTATCAGCTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATGTCTGGGCTGACGTTAGTAGCAGTAGTGAGATATTTTGCTCAGCTGGATCGTTTTGTCCAACAACAACAGAAAGAATTCCTTGCAGTAGTGGACATTACTGCAGGATGGGTTCCACATCTGAGAAAAGATGCTTCAAATTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCGTGCATATGGAATTATGCTGATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAATAGCCAAATCTAGAGAAGCAGCAGCTAGAACTGCAAGGAAGACTGCAAATGCGCGCCAAAGATGGCAATTTGCAAAAGATGCCACTAAGAAGGGTGCAATGGGGCTGCAAGCTCAACTATCTCGCACCTTCAAAAAGGATGCATCAATTCTGGAAAAAGTTAAAATTTTGAAAGAAGCAAATTCTGAAGCAGAAGTTGAATTGTTGTCACATTCACGACCTACAACTTCAAGCATGGTTGCTAGCTCATCTGTGGCAACAAAGGAAAAGGAAAAAGAACCCAGTGGTCTAATGCAGATAATACACGAAATTGAAAATGATCCTGATATTGATGACAATATTAAAACAGAAATAGAAACTAGAGGTAAAAGTGTTACAGCAAATGTGCCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAGGTATGCATATTCTGAACTCGAAAAAGAGAAGGCTCAGCAACAAGAAAACAAGAAGCTTACATTCTCGGGGGTAATTAAAATGGCTACAAACACTGAAAAAAGGAAAAGGCCTTTAATTGAAATTTCTTTCAAGGATCTCACTCTTACATTGAAAGCTCAAAACAAGCATATATTGAGATATGTTACTGGGAAAATTAAACCTGGGCGCATCACTGCTGTCATGGGTCCATCAGGGGCTGGTAAGACAACATTTATTTCAGCTCTAGCTGGAAAGGCGTTAGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCATTCCTTCAGGAAAATTACTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTAACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGTTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGCTATTGAATTCTTGGGGCTTCAATCAGTGCGTAATTCCTTGGTTGGAACTGTGGAAAAGCGAGGGATCTCTGGAGGTCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAGCCCTCACTATTGATCTTGGATGAACCCACGTCTGGCTTGGACAGTGCATCTTCTCAGCTGCTTCTAAGAGCTCTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCATTGTACAAGATGTTTGATGACCTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATAATGGATCTTCCAAGAAAGTTGAAGAATACTTTGCGGGCCTGGGGATCAACATTCCCGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCTTAACAACACCTGGTGGAAGCTCAGGACTCAGTTTTAAGGATCTGCCAGTCAGATGGATGCTTCATAATGGATATCCAATACCTTTTGATATGAGGCAGAATGAATTTCAATATGATACGTCCCAGAGTGTAAATTCAGCTTATGGAATTGATCCCTACGGATCCAGTCATGCAGAAAAAACCTTTGCTGGAGAATTATGGCAAGATATGAGAAACAACGTGGAACTGAGGGGGGAAAAGATAAGACACAATTTTTTTAAATCCAAGGATTTATCTGACCGGAAAACTCCTGGTGTTTTCAAACAATATAAGTACTTTGTTATACGGGTTGGGAAGCAGCGGTTACGAGAAGCTAGGACCCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGTGCCTGCTTAGGATCTCTTACAAAAGGCAGTGAGCAAACGTTTGGGGCAGCTGGGTACACCTATACGGTGATTGCTGTATCTCTTTTGTGCAAAATAGCGGCCTTGAGATCATTTTCCTTGGAAAAATTACACTACTGGCGGGAGAGTGATGGTGGCATGAGCAGCTTGGCTTATTTCCTCTCTAAAGACACCCTAGATCACTTTAATACAGTGATCAAGCCTGTGGTGTACCTTTCTATGTTCTATTTCTTCACCAATCCGAGATCAACTTTTGCAGATAATTATATTGTGCTGCTTTGTCTTGTATACTGTGTTACTGGTATAGCATATGCATTGTCCATATTTTTTGAACCAGGTGCTGCCCAGCTATGGTCAGTACTTCTTCCCGTTGTTTTAACTCTCGTTGCAACACAACCAAAAGATGGTAAAATTTTGGAGGCTATAGCTAATTTTTGCTACTCAAAGTGGGCTTTACAAGCATTAGTTGTTGCAAATGCTGAAAGGTATCAGGGGGTGTGGCTCATAACTCGTTGTGGTTCACTTTTGAAAAGTGGCTATAATCTTCATGATTGGACCTTGTGCATATCCATCCTCATTCTTATGGGTGTCATTGGCCGGGCTATAGCATTTTTCTGTATGGTCACCTTCCGAAAGAAGTAA 3348 0.4134 MCRWSISSKHLWVPIVVLTLFLWMRQLQCQQVNDYDQIDSPAVLPLVTQLVYSQISNLTSIISQEISRESSFCVKDPDADWNQAFNFASDLDFLASCIKKTRGDIVKRLCTAAEVKFFLNSLLGTSVSANYLKPNKNCNLTSWVSGCEPGWACSVPTSQKVDLKDSKEIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGICEPYFYQLPPMQPNHTCGGANVWADVSSSSEIFCSAGSFCPTTTERIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMRAYGIMLIAALSTLLLIIYNCSDQVLTTRERRIAKSREAAARTARKTANARQRWQFAKDATKKGAMGLQAQLSRTFKKDASILEKVKILKEANSEAEVELLSHSRPTTSSMVASSSVATKEKEKEPSGLMQIIHEIENDPDIDDNIKTEIETRGKSVTANVPKGKQPHTHSQIFRYAYSELEKEKAQQQENKKLTFSGVIKMATNTEKRKRPLIEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFISALAGKALGCSVTGSILINGRNESIHSFRKITGFVPQDDVVHGNLTVEENLWFSAQCRLSVDLSKPEKVLVVERAIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALYKMFDDLILLGKGGLTVYNGSSKKVEEYFAGLGINIPERINPPDYFIDILEGLTTPGGSSGLSFKDLPVRWMLHNGYPIPFDMRQNEFQYDTSQSVNSAYGIDPYGSSHAEKTFAGELWQDMRNNVELRGEKIRHNFFKSKDLSDRKTPGVFKQYKYFVIRVGKQRLREARTQAIDYLILLLAGACLGSLTKGSEQTFGAAGYTYTVIAVSLLCKIAALRSFSLEKLHYWRESDGGMSSLAYFLSKDTLDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLVATQPKDGKILEAIANFCYSKWALQALVVANAERYQGVWLITRCGSLLKSGYNLHDWTLCISILILMGVIGRAIAFFCMVTFRKK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00654 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 251 1102 - -
Spst10g00654 1115 FunFam ABC transporter G family member 24 502 744 - -
Spst10g00654 1115 MobiDBLite consensus disorder prediction 392 419 - -
Spst10g00654 1115 Pfam ABC-2 type transporter 706 1115 IPR043926 GO:0140359
Spst10g00654 1115 Pfam ABC transporter 527 677 IPR003439 GO:0005524
Spst10g00654 1115 MobiDBLite consensus disorder prediction 392 409 - -
Spst10g00654 1115 ProSitePatterns ABC transporters family signature. 649 663 IPR017871 GO:0005524|GO:0016887
Spst10g00654 1115 SMART AAA_5 534 726 IPR003593 GO:0016887
Spst10g00654 1115 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 508 749 IPR003439 GO:0005524
Spst10g00654 1115 CDD ABCG_EPDR 506 732 - -
Spst10g00654 1115 Gene3D - 506 742 IPR027417 -
Spst10g00654 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 730 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00654 Spst-Chr10 6771364 6778983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00654 503 709 Calmodulin-binding Proteins AT2G36910 28.302 5.35e-13 72.0