Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00630 ATGGGAAGAAAGGGCAATTGTGAGAATCAGTATGATATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAGAATTCTCATGAACTACGTTCAAGTCCATGGAGAAGGGAAATGGAGAGAGCTTTCCAAAAGAGCAGGGTTGAAAAGATGTGGGAAGAGTTGTAGACTTCGATGGCTGAATTATCTAAAGCCAGATATCAAGAGAGGAAACATTTCTTCCGATGAAGAAGATCTCATTATCAGATTACACAAACTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGCTTACCAGGGCGAACAGACAATGAAATTAAGAATTATTGGAATACTTATTTGAGAAAGAAGGTAGAGCACAAGCACAACCACAACGATGTTGTTGGCCATGACAACAACATTCCTATCAATTTAAGCTCCAAAAGTTCCTTGGGTGATGTTCTTGATCCTTCAAAACCCCCTCACCCAATTATGATTAAACCAAAATCAATGAGGTGCACCAAGGTTATGATGCCAGTCAATGATTCAGTCAACACCATGAATTTGATCGCAACGAACTGGGACAACCATAACCCTTCTTCATCCATGCCACAAGATGACCATAACCATTGCTTAACAGGTGTTCTTCAGGACTTTGACATCAGTGACTTGTTCATGTCGTACGAGGATGATGGGTATGCTTGTGTTGAGATACCCCAACATATTTTTGAAGATGAGACTTGGAGGCTTCATGATTCCATGGTTGAAGAAGCGTGGTACGAGAATTGGAAGCATGAGACCTACTTTTCACAAGAACAAGATATGGATATGGACAAAGAAACCAGGGAAAAATCAAACATACTTCAGCAATTAGTTCCAGATTTGCACAACAGTTATGGCGGCAGCATCGTCATACACTCCATTTTTGGGAATTAG 912 0.4101 MGRKGNCENQYDMNRGPWSAEEDRILMNYVQVHGEGKWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEHKHNHNDVVGHDNNIPINLSSKSSLGDVLDPSKPPHPIMIKPKSMRCTKVMMPVNDSVNTMNLIATNWDNHNPSSSMPQDDHNHCLTGVLQDFDISDLFMSYEDDGYACVEIPQHIFEDETWRLHDSMVEEAWYENWKHETYFSQEQDMDMDKETREKSNILQQLVPDLHNSYGGSIVIHSIFGN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00630 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Spst10g00630 303 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 167 - -
Spst10g00630 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Spst10g00630 303 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Spst10g00630 303 Gene3D - 15 67 - -
Spst10g00630 303 CDD SANT 72 113 IPR001005 -
Spst10g00630 303 FunFam Transcription factor TT2 71 140 - -
Spst10g00630 303 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Spst10g00630 303 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Spst10g00630 303 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Spst10g00630 303 SMART sant 14 64 IPR001005 -
Spst10g00630 303 SMART sant 67 115 IPR001005 -
Spst10g00630 303 CDD SANT 17 62 IPR001005 -
Spst10g00630 303 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Spst10g00630 303 FunFam MYB-related transcription factor 14 67 - -
Spst10g00630 303 Gene3D - 72 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00630 Spst-Chr10 6467834 6474591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00630 7 117 MYB Transcription Factor Family AT3G13540 72.072 1.24e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Spst10g00630 Myb_DNA-binding 3.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00630 K09422 - gmx:100794570 460.299