Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00613 ATGAACGGCAGACATGGTTTAGCCCCCCAATCTGTGGCACAAGAGTGGCCTGGATTACCTATTGGCGTTAAATTTGATCCATCTGATCAAGAGATAAGATGGCACTTGCTTGCAAAAGTTGGTGCTGAAAATTCAAAGCCTCACCCTTTCATGAGATGGTGGGATATGTTATACTCATCCTCAACATTTATCAGTTGGATAGCTTGA 207 0.43 MNGRHGLAPQSVAQEWPGLPIGVKFDPSDQEIRWHLLAKVGAENSKPHPFMRWWDMLYSSSTFISWIA 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00613 68 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 8 51 IPR044799 GO:0003700
Spst10g00613 68 SUPERFAMILY NAC domain 10 58 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00613 Spst-Chr10 6181823 6183019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00613 14 51 NAC Transcription Factor Family AT1G28470 55.263 6.06e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00613 - - gmx:100787702 83.5741