Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00599 ATGATTTCCACAGAAGTGGAAGGGGCTAAGAAGTCATATGGGGTATACGACAGCAACACTGCAACAAAACTGTTTGTTTTTGGGGACTCCTATGTTGACACAGGGAATTTCGTGCATTCAGAATCATACAAGCCTCCCAATGGAATCACTTTTCCTGGTAAACCTGCAGGGAGATTCTGTGACGGTCGCATTCTCACTGATTATGTTGCTTCCTTTCTGAAAATTGAATCCCCTACACCATATACGTTGAGAAATTCGTCTAATCTGCAGTACGGCATAAACTTTGCCTATGGAGGGACTGGTATTTTCAACACTTCCATTGATGGACCAAACATGACTGCCCAAATTGACTCATTTGAGAACCTAATCCAACAAAATATCTATACCAAACATGATCTTGAATCCTCAATTGCTCTCGTCAATGCTGGTGGTAATGATTATACAAATGCAGTTAAAAATGGGCGCATTTTAGATATGCCAGCCTTCATTGAATCCCTTGTGAAGCAAATATCTGTAAATCTGAATCGCATTCACAGCTTAGGGATAAATAAGGTAGCAGTGGGGTTATTACAACCAATTGGGTGTTTGCCTGCGTTGAATGTGATATCTTTCCGTAAGAAATGCATTAGCGTTTTGAACTTTGTCTCCAAAGATCACAACATAAAGCTGCTCCAAGCTATAGAACAACTCAACAATCAAACAGGCAAATCAGTTTTCATAACACTAGATCTCTACAGCTCCTTCTTCTTAGTAATTGAAACAATGCAGAAACAGCATGCTGCCAAGATATCATCAATGGTGAAGCAAACTCTATCAGTAATCACTCTGCTCCTTCTCATCTTCTTCATTTTAAGAGAAGTGGAAGGGGCTGAAAGGTTAGATGAGGTAAAACTATTTGTTTTTGGAGACTCTTATGTTGACACGGGGAATTCGGTGAACTCAGCATCGTATCAGCCTCCTAGTGGAATTACTTTTCCTGCTAAACCTGCTGGAAGGTTCTCTGATGGTTGTGTCCTCACAGATTACATTGCTTCATTTTTGAAAATAAAATCCCCCACACCCTATACATTTAGAAATTCCTCTGAACTACAATATGGTATGAACTTTGCTCATGGAGGGACTGGTATTTTCAATACTTTGGTTGAGGGACCAAACATGACTGTCCAAATTGACTCATTTGAGAAGCTAATCCAACAAAAAATCTATACTAAAGCCGACCTTGAATCTTCAATTGCTCTAGTCAATGCTGCGGGTAATGACTATGCTACATTTCTACAAGGAAAACATGGGAGCATACAAGATATACCAGTTTTCACTGCATCCCTTATTCAGCAAATGTCTTTAAATCTCAGACGTATCCACAGTTTGGGAATAAACAAAATAGCAGTGGGATTATTAGAGCCTATAGGGTGCATGCCTTTGTTAACTGTGGCATCTTCTTATGACAAATGCCTTGAACCTTTCAACTTCGTCTCCCAAAATCACAGTCAAAGGCTTCTCCAAATTGTGCAAGAACTTAACAAGGAATTGGGAAAACCGGTCTTCGTGACACTAGACCTATACAACTCTTTCCTCTCTGTAATTGCAACTATGCAGAAAAGGCGTTCTGGTAAGTTCTCCATCTGCTTTTACTAA 1635 0.3976 MISTEVEGAKKSYGVYDSNTATKLFVFGDSYVDTGNFVHSESYKPPNGITFPGKPAGRFCDGRILTDYVASFLKIESPTPYTLRNSSNLQYGINFAYGGTGIFNTSIDGPNMTAQIDSFENLIQQNIYTKHDLESSIALVNAGGNDYTNAVKNGRILDMPAFIESLVKQISVNLNRIHSLGINKVAVGLLQPIGCLPALNVISFRKKCISVLNFVSKDHNIKLLQAIEQLNNQTGKSVFITLDLYSSFFLVIETMQKQHAAKISSMVKQTLSVITLLLLIFFILREVEGAERLDEVKLFVFGDSYVDTGNSVNSASYQPPSGITFPAKPAGRFSDGCVLTDYIASFLKIKSPTPYTFRNSSELQYGMNFAHGGTGIFNTLVEGPNMTVQIDSFEKLIQQKIYTKADLESSIALVNAAGNDYATFLQGKHGSIQDIPVFTASLIQQMSLNLRRIHSLGINKIAVGLLEPIGCMPLLTVASSYDKCLEPFNFVSQNHSQRLLQIVQELNKELGKPVFVTLDLYNSFLSVIATMQKRRSGKFSICFY 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00599 544 Pfam GDSL-like Lipase/Acylhydrolase 298 522 IPR001087 GO:0016788
Spst10g00599 544 Pfam GDSL-like Lipase/Acylhydrolase 24 245 IPR001087 GO:0016788
Spst10g00599 544 Gene3D SGNH hydrolase 296 538 IPR036514 -
Spst10g00599 544 Gene3D SGNH hydrolase 11 270 IPR036514 -
Spst10g00599 544 PANTHER OSJNBB0059K02.9 PROTEIN 285 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00599 Spst-Chr10 6048263 6054123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00599 298 528 Pollen Coat Proteome AT1G75930 26.275 1.66e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00599 - - vum:124821472 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00599 10 6048263 6054123 Spst10g00599 10 6048263 6054123 ECH