Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00597 ATGCACTCTTCCGCTGAGGACGACTCCGACAATCCCACCACCACCGCCGGCGGGGAGTGGACGTTATCCGTCAGGGCCCACGCTCCCTCGTTGGACCCCTGCTGGGAAGCCATACAGCGCGGCGGCGGCACGCTGGGACTGGGCGACCTCCGGTTCGTGCAGCGCGTGGGGAGCGGCGACATCGGAAGCGTGTACTTGGTGGAGCTGAAGGGCTCGAACGGGTGCCTCTTCGCGGCGAAGGTGATGGACAAGAAGGAACTCGTGGCGAGGAACAAAGACACGAGGGCGAAGGTTGAGAGAGAGATTCTGCAAGTTGTGGATCACCCTTTTTTGCCCACTCTTTACGCGTCGCTTGATTCCCCTCGCTGGTCTTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAGCGCCAGCCCGATAAACGCTTCCACCACGCCGCCGTTAGGTTCTACGCATCCGAAGTTGTGGTTGCCTTGGAGTACCTACACATGATGGGGATAATATACCGTGATTTGAAGCCTGAAAATGTGCTCATAAGATCGGACGGTCACGTAATGCTCACCGACTTTGACCTCTCACTGAAAGGCGACGACACAACATCCACGGCTCAGATCGTCTTCGGACAAGATCCACCCACCAACACCTGTTCGAACGAGCATTCCAAGAACCAATGCGCGCCCGCCATGTCATCATGCATGTTGCCCAGTTGCATCGTGCCATCTGTGCCGTGCTTCCATCCAAAACGCGGTCGTGGCAAGAGGTCCTCTCGGTGTGGGTCCGTGGAGATCATAGCGGAGCCAATAGAAATTCGATCCACGTCGTTCGTTGGGACCCACGAGTACTTGGCGCCGGAAGTGATTTCGGGGGAGGGTCACGGTAACGCCGTGGATTGGTGGACATTGGGAGTGTTCATTTTTGAACTGTTCTACGGGATCACACCCTTCAAAGGGCTTGAGCATGAGCTAACCCTAGCCAACATAGTGGCACGTGCCCTTGAGTTCCCTAAGGAGCCCATCATCCCAGGAGCAGCCAGGGATTTGATCTCCCAACTTTTGGTGAAGGACTCCACAACGAGACTAGGCTCAACAATGGGTGCCCTAGCAATTAAGCACCACCCCTTCTTCAATGGGGTGAATTGGGCATTGTTGAGGTGTGCTACCCCTCCCTACATCCCTTCATCAGACAAGTGCAAGGAATTGGTTCGACTCTATAATTGCTCAACCAATACTGTAGACTTCTATTAG 1260 0.5611 MHSSAEDDSDNPTTTAGGEWTLSVRAHAPSLDPCWEAIQRGGGTLGLGDLRFVQRVGSGDIGSVYLVELKGSNGCLFAAKVMDKKELVARNKDTRAKVEREILQVVDHPFLPTLYASLDSPRWSCLLTEFCPGGDLHVLRQRQPDKRFHHAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHVMLTDFDLSLKGDDTTSTAQIVFGQDPPTNTCSNEHSKNQCAPAMSSCMLPSCIVPSVPCFHPKRGRGKRSSRCGSVEIIAEPIEIRSTSFVGTHEYLAPEVISGEGHGNAVDWWTLGVFIFELFYGITPFKGLEHELTLANIVARALEFPKEPIIPGAARDLISQLLVKDSTTRLGSTMGALAIKHHPFFNGVNWALLRCATPPYIPSSDKCKELVRLYNCSTNTVDFY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00597 419 FunFam serine/threonine-protein kinase D6PK-like 275 398 - -
Spst10g00597 419 SMART serkin_6 50 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00597 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Spst10g00597 419 ProSiteProfiles Protein kinase domain profile. 50 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00597 419 Gene3D Transferase(Phosphotransferase) domain 1 276 398 - -
Spst10g00597 419 PANTHER FLIPPASE KINASE 1-RELATED 21 400 - -
Spst10g00597 419 MobiDBLite consensus disorder prediction 1 21 - -
Spst10g00597 419 Gene3D Transferase(Phosphotransferase) domain 1 135 210 - -
Spst10g00597 419 FunFam serine/threonine-protein kinase D6PKL2 49 134 - -
Spst10g00597 419 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
Spst10g00597 419 CDD STKc_phototropin_like 53 397 - -
Spst10g00597 419 SUPERFAMILY Protein kinase-like (PK-like) 38 398 IPR011009 -
Spst10g00597 419 FunFam Serine/threonine-protein kinase OXI1 135 203 - -
Spst10g00597 419 Pfam Protein kinase domain 277 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g00597 419 Pfam Protein kinase domain 52 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00597 Spst-Chr10 6032642 6034989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00597 52 419 AGC Kinase Gene Family AT3G44610 63.613 4.66e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst10g00597 Pkinase 4.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00597 K08286 - gmx:100786154 751.125